Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., type VI secretion system tip protein VgrG from Pseudomonas aeruginosa PA14

 Score =  308 bits (790), Expect = 7e-88
 Identities = 201/599 (33%), Positives = 302/599 (50%), Gaps = 75/599 (12%)

Query: 98  YQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFALKRDGVQREFCVQYR 157
           YQ+ L P L  L+L  N+R+FQ     +I++ +  + G +DY   L      RE+CVQY 
Sbjct: 90  YQVLLRPWLWWLTLASNNRVFQNLATSDIVTQVFDQHGFSDYQLQLSGSYQPREYCVQYG 149

Query: 158 ESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLPEPIPYNALVGGAIDTPYI 217
           ESD+ F+ RL  E+G+ + F H AGKHTL  +D++D+   +P   P  A +G  I    +
Sbjct: 150 ESDLAFVSRLLEEDGIFWFFTHAAGKHTLVLADSNDAFPPIPNG-PQVAYLGQGIGVREL 208

Query: 218 HGLT---YRTQAEVSEVQLKDYSFKKPA---YSFLQTVQGTELDYQQTRYQHFDAPGRYK 271
            G+    Y  QA        DY F  P+   YS  + V G    YQ         PG Y 
Sbjct: 209 QGVRSAQYSLQAVSGTYSATDYEFTTPSTSLYSQAEAVSGAAGVYQH--------PGGYT 260

Query: 272 DDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVVVSINHQ 331
               G + ++ R+D LR       G+S+   L  G+ F L  H D ++N DWV+ S+ H 
Sbjct: 261 AKAQGDSLTKQRIDGLRSQETRLIGESDCRWLVPGHWFTLSGHDDDSLNIDWVLTSVTHD 320

Query: 332 GEQPQALQEDGGSGATTYSNQFSLIPGHLHWR-AEPQPKPQVDGPMIATVVGPEGEEIFC 390
                            Y N+F  IP    +R A   PKP++     A VVG  GEEI+ 
Sbjct: 321 ASHAH------------YRNRFEAIPKATAYRPARVTPKPRMH-TQTALVVGKAGEEIWT 367

Query: 391 DEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQ 450
           D++GR+KI FPWDR    +E SSCWVRV   W+G  +G   +PRIG EVIV F++GDPD+
Sbjct: 368 DQYGRIKIQFPWDRDGKNDETSSCWVRVVLPWSGKGFGMQFVPRIGQEVIVTFIDGDPDR 427

Query: 451 PIITGRTYHATNTPPYTLPEHKTKTVLRTETHQ-GEGFNELSFEDQAGKEQIYLHAQKDF 509
           P++TG  Y+  N  PY LP+++T++ ++T + + G GFNEL FED+   E+++L AQKD 
Sbjct: 428 PLVTGCVYNGDNALPYALPDNQTQSGIKTNSSKGGGGFNELRFEDKKDAEEVFLQAQKDL 487

Query: 510 DGLIENDHTTVIRHDHHLTVENDQFTQIKH-NQHLTVEWESREA---------------- 552
           +  + ND T  I HD  LTV+N +   +K  ++ +T+E   R                  
Sbjct: 488 NVNVLNDSTASIGHDETLTVQNARTRTVKEGDETVTLEKGKRSVTIQTGSDSLDVKDTRT 547

Query: 553 ------------------VTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKVVIEAG 594
                             V+G+  L+++G+L +K       ++G  + +K+   +  +AG
Sbjct: 548 VTVGADQTHSTGGNYSHKVSGDFELTVDGNLTIKVSGTLALQSGGSLTLKSDADLAAQAG 607

Query: 595 SEITVKAGGSFVKVDPAGVHL---SGALVNLNSGGSAGSGSGF-----GGAMPALPGGL 645
           + +T KAG S    + AG  L   +G  +  ++G S  + +G      GG M  + GGL
Sbjct: 608 TSLTSKAGTSL--TNQAGTSLTNKAGTSLTNDAGVSLTNKAGAEQTVDGGGMLTIKGGL 664