Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., type VI secretion system Vgr family protein from Marinobacter adhaerens HP15

 Score =  660 bits (1703), Expect = 0.0
 Identities = 350/691 (50%), Positives = 456/691 (65%), Gaps = 29/691 (4%)

Query: 4   LAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDK 63
           L +++ V GL  +   + GF   E LS  VF G+        ++LAS   ++ A +++++
Sbjct: 7   LQFTVRVGGLPSDIFSLVGFTLTECLSE-VFHGR--------LELASTDPSIQAAEILEQ 57

Query: 64  RAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTV 123
             +L ++++ + ++R  G+V  F +GD GH  T Y+L +   L RL L HNSRIFQ Q+ 
Sbjct: 58  PVDLVVWQDGEPLRRFTGVVNEFVRGDAGHRRTRYELNIQSPLWRLGLMHNSRIFQTQSS 117

Query: 124 PEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEA-- 181
             I   LL+E GI D  F LKR   QRE+CVQ+RESD+ FL RLAAEEG  Y + H +  
Sbjct: 118 DTIARTLLEERGIIDSVFDLKRTPEQREYCVQHRESDLAFLERLAAEEGWHYRYEHGSVD 177

Query: 182 --GKHTLYFSDASDSLSKLPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFK 239
              +  L  +D      KL EP  Y A  GG+   P ++   Y  +  V+ V +KDY+FK
Sbjct: 178 ADTQPALVIADHHGDAPKL-EPAEYKARAGGSSRRPVVYRFRYEERVRVASVAMKDYTFK 236

Query: 240 KPAYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSN 299
            PAY+ +      +L +++  YQH+D PGR+K D +G  F++ RL  LR  A TA+G+SN
Sbjct: 237 NPAYALMHQHASGDLKHRED-YQHYDYPGRFKADASGQPFTEARLQSLRNDASTASGESN 295

Query: 300 EPLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGH 359
            P   AG K +L+EH   A+NR+W++ ++ H G QPQAL+E+GGS  TTY N+F+ IP  
Sbjct: 296 RPDFSAGAKVELKEHDSDALNREWLLTAVTHTGTQPQALEEEGGSEPTTYHNRFNAIPAD 355

Query: 360 LHWRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVS 419
           L WR     +P +DGP IA V GPEGEEI CDEHGRVK+ FPWDRYS  +E SS W+RVS
Sbjct: 356 LTWRPRTPHRPLMDGPQIAIVTGPEGEEIHCDEHGRVKVRFPWDRYSKNDEHSSAWLRVS 415

Query: 420 QGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRT 479
           QGWAG QYGF+A+PRIGHEVIV FL+GDPDQPIITGRT+H TNTPPY LPEHKT+T L+T
Sbjct: 416 QGWAGGQYGFMALPRIGHEVIVSFLDGDPDQPIITGRTHHITNTPPYGLPEHKTRTTLKT 475

Query: 480 ETHQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKH 539
           +TH+GEG NEL FED+A +EQIY+HAQKD D L EN+ T VIR+D H TVEN++F+ +K 
Sbjct: 476 KTHKGEGSNELRFEDEADQEQIYVHAQKDLDLLTENNRTEVIRNDSHRTVENNEFSHVKG 535

Query: 540 NQHLTVEWESREAVTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKVVIEAGSEITV 599
           N+H TV+ E RE+V  +  LSI GSLH K GK  + EAGTEIH KAG KVVIEAG+E+T+
Sbjct: 536 NEHRTVDGEQRESVGSDYSLSIGGSLHSKQGKNQLVEAGTEIHHKAGMKVVIEAGAELTL 595

Query: 600 KAGGSFVKVDPAGVHLSGALVNLNSGGSAGSGSGFGGAMPALPGGL-------EPAV--- 649
           KAGGSF+K+DP+GV +SG  V +NSGG  GSGSG     PALP  L       +PA    
Sbjct: 596 KAGGSFLKLDPSGVTVSGPSVRMNSGGGPGSGSGVSAQDPALPASLSEIADTNKPAQLAE 655

Query: 650 ----ALAPPQTISYQALLQAEQANVPAVKVC 676
               ALA P   S QAL  A + +V  VK C
Sbjct: 656 TDTRALAGPTPSSVQALKAAARNDVALVKQC 686