Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., type IV secretion protein Rhs from Klebsiella michiganensis M5al

 Score =  283 bits (725), Expect = 2e-80
 Identities = 183/564 (32%), Positives = 285/564 (50%), Gaps = 90/564 (15%)

Query: 98  YQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFALKRDGVQREFCVQYR 157
           YQ  L P L  L+L  N+R+FQ     EI+  + ++ G  DY F LK    +RE+C+QY+
Sbjct: 79  YQFVLRPWLWWLTLSSNNRVFQNLNAQEIVEKVFKDGGFTDYKFQLKSKPAKREYCLQYK 138

Query: 158 ESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLP--EPIPYNALVGGAIDTP 215
           ESD +F+ RL  +EG+ + F H+ GKHTL  +D + +   +P  + + Y A   G  +T 
Sbjct: 139 ESDFNFVSRLLEQEGIFWFFTHKEGKHTLVLADDNSACPPIPGEKKVKYQAAQNGGRETG 198

Query: 216 YIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVN 275
            I     R QA                     T QG               PG  K +  
Sbjct: 199 MIRSAQLRLQA---------------------TAQGAH-------------PGNDKSE-- 222

Query: 276 GAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQP 335
                               G+S+ P L AG+ F L +H D A N DW++ +++      
Sbjct: 223 --------------QPKQLIGESDCPALMAGHWFTLADHDDKATNIDWLITTVS------ 262

Query: 336 QALQEDGGSGATTYSNQFSLIPGHLHWRAE-PQPKPQVDGPMIATVVGPEGEEIFCDEHG 394
              QE  G     Y N+F+ IP    +      PKP +     ATVVG  GEEI+ D+ G
Sbjct: 263 ---QEYDGE---RYRNRFTAIPKATPYHPPCATPKPFMP-TQTATVVGKNGEEIWTDKLG 315

Query: 395 RVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIIT 454
           RVK+ FPW+R    +E  SCW+RV+  W+G+ +G   IPRIG EV+V F++GDPD+P+IT
Sbjct: 316 RVKVQFPWEREGKNDEIGSCWLRVATAWSGNGFGAQFIPRIGQEVVVSFIDGDPDKPLIT 375

Query: 455 GRTYHATNTPPYTLPEHKTKTVLRTETHQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIE 514
           G  Y+  N  PY LP ++T++ ++  TH  +GFNEL F+D+   E + + AQKDF   + 
Sbjct: 376 GCVYNGANALPYALPANQTQSGIK--THSEQGFNELRFDDKKDAELLAMQAQKDFQVTVL 433

Query: 515 NDHTTVIRHDHHLTVENDQFTQIKHNQHLTVEWESREAVTGEQVLSIEGSLHVKTGKVWV 574
           ND TT++ HD  L+V+N +   +K +Q   ++      V G   L+++G+L +K      
Sbjct: 434 NDSTTIVGHDEILSVKNKRSVTVKGDQEHAIDGNETHKVKGNYTLNVDGNLTIKV----- 488

Query: 575 NEAGTEIHVKAGQKVVIEAGSEITVKAGGSFVKVDPAGV------HLSGALVNLN----- 623
             +GT + +++G+ + I++G+ +   A GS +K+D A +       LS   V ++     
Sbjct: 489 --SGT-LTLESGKTLDIKSGAGLNASASGS-MKLDAASIASEAKSSLSQKAVTISQEARA 544

Query: 624 --SGGSAGSGSGFGGAMPALPGGL 645
             +  ++ + +  GG M  + GGL
Sbjct: 545 TLTSKASATQTVDGGGMLVIKGGL 568