Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 919 a.a., type VI secretion system Vgr family protein from Ralstonia sp. UNC404CL21Col

 Score =  150 bits (378), Expect = 6e-40
 Identities = 144/579 (24%), Positives = 240/579 (41%), Gaps = 107/579 (18%)

Query: 41  GFRYEVQLASRVSNLTAEQMVDK--RAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFY 98
           GFR E+   S  +++ + +++ +  R +L   ++   ++  HG V  F Q         Y
Sbjct: 48  GFRLELTALSDNADIDSAKLLGQPVRLDLLTQQSRSALRPFHGHVTRFEQVGANGGLVRY 107

Query: 99  QLTLVPALERLSLRHNSRIFQKQTVPEILSILL-----QEMGINDYAFALKRDGV--QRE 151
           +L + P L  L  R +S +FQ  +V E++  L      Q   +  + +AL+   V  +R 
Sbjct: 108 RLVIEPWLAFLRHRQDSFLFQDMSVIEVVDSLFGDYQGQGRLVPAWRWALRDSSVYTRRS 167

Query: 152 FCVQYRESDIDFLHRLAAEEGLVYSFVHEA------GKHTLYFSDASDSLSKLPEPIPYN 205
              QY ESD DF+ RL AEEGL Y F HEA      G H +  +D++D  +   +     
Sbjct: 168 VITQYDESDFDFVTRLLAEEGLFYFFEHEAKDGDALGVHRMVIADSNDVFADNAQA---- 223

Query: 206 ALVGGAIDTPYIHGLTYRTQA----EVSEVQLKDYSFKKPAYSFLQT-VQGTELDYQQTR 260
           ++  G  D      +  R Q     + + V +  + ++  A    Q   Q    D  Q  
Sbjct: 224 SIRFGRADATATEDVIDRWQGARRWQTNAVSIASWDYRANAKRTAQLGAQQQSNDGPQLT 283

Query: 261 YQHFDAPGRY--KDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPA 318
            Q  D PG+Y  +D+      +++ ++ L        G+     L  G +F L +H D  
Sbjct: 284 LQDTDYPGQYWFEDNNQAQRVARLMMEALELRDKQFDGEGTARTLATGTRFQLLDHFDHD 343

Query: 319 MNRD-WVVVSINHQGEQP------QALQED-----------------GGSGATTYSNQFS 354
                + V+++ HQ          Q L E                   G  A  Y N F+
Sbjct: 344 DGEQRFAVLAVTHQARNNFNDRFGQVLTETLGALRGGDVLAAGSNSGAGDDAPFYRNHFT 403

Query: 355 LIPGHLHWRAEPQ--------PKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYS 406
           ++  ++  R +          P+P V+G   A VVG EG  +  D   R+K+ F W R +
Sbjct: 404 VVRDNVPVRPQQSDAQGRALHPRPTVNGSQTALVVGAEGP-VHTDRDHRIKVQFHWQRGA 462

Query: 407 NGNEQSS---------------CWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQP 451
               + S                WVRV+   AG  +G +A+PR+G EV+VEFL GD D+P
Sbjct: 463 RSASRQSHPAGDDNARASVGLGAWVRVTAPVAGPNWGGVALPRVGQEVLVEFLQGDIDRP 522

Query: 452 IITGRTYHAT-------------------NTPPYTLPEHKTK---------TVLRTETHQ 483
           ++ G  Y+ +                   N P +   + K++         + ++T+   
Sbjct: 523 VVVGAAYNGSGQTDAQYNQNQAGAAGATGNAPAWFAGDSKSQGAYAHNAVLSGIKTQALA 582

Query: 484 G-----EGFNELSFEDQAGKEQIYLHAQKDFDGLIENDH 517
           G      G+N+L F+D AG+ +  L   +   GL+   H
Sbjct: 583 GSQSGSSGYNQLVFDDSAGQGRTQLSTTQAASGLVLGHH 621



 Score = 29.6 bits (65), Expect = 0.001
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 10/91 (10%)

Query: 564 SLHVKTGKVWVNEAGTEIHVKAGQKVVI---------EAGSEITVKAGGSFVKVDPAGVH 614
           ++H  +GKV ++    E H+ A + V +         EA   + V A G+ +KV    + 
Sbjct: 807 AMHAASGKVGLSSLKGETHLVAEKAVTVASTQGNVTAEAKQHVLVNAAGAQIKVTNGTIE 866

Query: 615 L-SGALVNLNSGGSAGSGSGFGGAMPALPGG 644
           L +  +V     G    G G  G   +L  G
Sbjct: 867 LHAPGMVTFKGAGHRFVGPGGAGGDNSLAQG 897