Pairwise Alignments

Query, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

Subject, 781 a.a., type VI secretion protein ImpA from Burkholderia phytofirmans PsJN

 Score =  148 bits (373), Expect = 2e-39
 Identities = 117/457 (25%), Positives = 201/457 (43%), Gaps = 31/457 (6%)

Query: 76  VQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMG 135
           ++++ G++ +           FY+L L P L   +L  +SR +Q++ V EI   +LQ+  
Sbjct: 103 IRKLTGLIVSAQCVGADDRRAFYRLKLRPWLWLATLNRDSRFWQERDVIEITRDVLQKYP 162

Query: 136 INDYAFALKRDGVQRE------FCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFS 189
              +   L   G+QR       +  Q+ ESD  +L+R+  E G+ + F     + TL   
Sbjct: 163 F-PFELRLAGPGMQRRPYPKRNYQRQWWESDFCYLNRIWQEWGISFFFE----RSTLVLC 217

Query: 190 DASDSLSK---LPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKP----- 241
           D+  +  K     + + Y    G  ID  ++H      Q    +V L DY + +      
Sbjct: 218 DSPGAYKKHGPAYQTLRYLERDGQRIDEEHVHEFRVARQLTTGKVSLTDYDYTQSLGNLA 277

Query: 242 -------AYSFLQTVQGTELDYQQTRYQHFDAPGRYKD-DVNGAAFSQIRLDYLRRHAHT 293
                    +F    +    DY Q         G + D    G   ++++++  R  +  
Sbjct: 278 VAQEDYGGRAFDNAEEYAWGDYSQPMEGPMGTRGLHGDAQFEGEHLARVKVEAHRAKSLR 337

Query: 294 ATGQSNEPLLRAGYKFDLQEH-LDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQ 352
           A G+ N   L  GY F L+ + L P      VV +I          Q        + + +
Sbjct: 338 AKGKGNLRGLMTGYTFTLEGYPLTPGDGEYLVVSTITEIVNNDTVTQRGAIDRQYSCTTK 397

Query: 353 FSLIPGHLHWRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQS 412
           F+ +P +  +R   + K        A V G   E ++CDE+GRVK HF WDR    +E +
Sbjct: 398 FAAVPANTFYRTPQKAKKPRAYAEAAVVTGYGDEPVYCDEYGRVKAHFIWDRLGEKDENA 457

Query: 413 SCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHK 472
           SCW+RV+  W G ++G + +PR+GH V+V + + DPD+P I        +  P+ LP++ 
Sbjct: 458 SCWLRVASPWHGVEHGAMWLPRVGHHVLVGYYDSDPDRPYIISEHTTEFHQAPWQLPKND 517

Query: 473 TKTVLRTETHQGEGFNELSFEDQAGKEQIYL---HAQ 506
             +  R+   +G   N +  +D  G+ Q+ +   HAQ
Sbjct: 518 ALSGWRSRDLKGLAANSVVTDDTPGQLQVQVASDHAQ 554