Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 93 a.a., hcp from Pseudomonas fluorescens FW300-N2E2

 Score =  102 bits (254), Expect = 2e-27
 Identities = 49/90 (54%), Positives = 59/90 (65%)

Query: 80  LLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASIVDIHCEMPHCQDPAKSDFT 139
           +L   L  GE L  VE+KWYRTS  G QE+++TT LE+A IV+I   M +CQDPA S FT
Sbjct: 1   MLQEVLCRGETLAKVEIKWYRTSASGTQEHYYTTTLEDAIIVEIKDYMLNCQDPANSHFT 60

Query: 140 QNVTVSLSYRKITWDHVNAGTSGSDDWRKP 169
               V  SYRKITW+H+   T G DDWR P
Sbjct: 61  HLQDVHFSYRKITWNHIACSTLGVDDWRAP 90