Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 171 a.a., Secreted protein Hcp from Pseudomonas fluorescens FW300-N1B4

 Score =  210 bits (535), Expect = 9e-60
 Identities = 97/170 (57%), Positives = 129/170 (75%)

Query: 1   MPTPCYISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPS 60
           M TP Y+S+ G+ QGLITAGA TADS+G+++ EGHED+++VQ F H V +P DPQSGQP+
Sbjct: 1   MATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFSHDVIIPRDPQSGQPT 60

Query: 61  GQRVHKPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASI 120
           GQRVHKP   T   +K+ PLL  AL+SGE++  + ++WYRTS +G QE+++TTKLE+A I
Sbjct: 61  GQRVHKPVVITKVYDKSSPLLQAALTSGERMSEIVIQWYRTSAQGTQEHYYTTKLEDAII 120

Query: 121 VDIHCEMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPI 170
           V I+ +M +CQDP+ S FT    V  +YRKITW H  +GTSGSDDWR P+
Sbjct: 121 VAINNKMHNCQDPSNSHFTHLEEVQFTYRKITWTHEVSGTSGSDDWRVPV 170