Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 172 a.a., type VI secretion system effector, Hcp1 family from Pseudomonas stutzeri RCH2

 Score =  216 bits (551), Expect = 1e-61
 Identities = 101/170 (59%), Positives = 124/170 (72%)

Query: 1   MPTPCYISIEGQTQGLITAGACTADSIGDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPS 60
           MPTP Y+S+EG  QGLITAG  T DS+G+ F EGHED++LVQ F H V +P DPQSGQP+
Sbjct: 1   MPTPAYLSLEGTKQGLITAGTFTEDSVGNIFQEGHEDQILVQAFQHQVIIPRDPQSGQPT 60

Query: 61  GQRVHKPFKFTVALNKAVPLLYNALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASI 120
           GQRVHKP   T   +K+ PL++NAL+SGE+L    L+WYRTS  G QE++FT +LE+A I
Sbjct: 61  GQRVHKPLMITKVFDKSSPLIFNALTSGERLNKCRLEWYRTSSTGTQEHYFTIELEDAVI 120

Query: 121 VDIHCEMPHCQDPAKSDFTQNVTVSLSYRKITWDHVNAGTSGSDDWRKPI 170
           VD+   MP+CQDP  S FT    V  +YRKI W H  +GTSGSDDWR PI
Sbjct: 121 VDVQSRMPNCQDPNMSHFTHLEDVYFTYRKIVWTHEVSGTSGSDDWRTPI 170