Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 163 a.a., type VI secretion system tube protein Hcp from Rahnella sp. WP5

 Score = 85.9 bits (211), Expect = 3e-22
 Identities = 44/145 (30%), Positives = 74/145 (51%)

Query: 28  GDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPSGQRVHKPFKFTVALNKAVPLLYNALSS 87
           G S V   E  + +Q F H ++VP D  +G+ +  RVH+        +K+ P LY A+++
Sbjct: 19  GGSEVLSREGAIEIQSFTHGLSVPFDGNTGRLTSTRVHQTMGLVKEFDKSTPYLYRAVAT 78

Query: 88  GEKLKTVELKWYRTSIEGKQENFFTTKLENASIVDIHCEMPHCQDPAKSDFTQNVTVSLS 147
            EKL+   +KWYR +  G +E F    +E   I++I+  M + +           ++ L 
Sbjct: 79  SEKLQKAVIKWYRINAAGMEEEFLNMTMEGVRILNINPHMHNFKQADGQASMPTESIGLG 138

Query: 148 YRKITWDHVNAGTSGSDDWRKPIEA 172
           Y+KITW +++   S +D W   I A
Sbjct: 139 YQKITWLYLDGHISFTDQWNSSIYA 163