Pairwise Alignments

Query, 172 a.a., type VI secretion system tube protein Hcp from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., Hcp family type VI secretion system effector from Ralstonia sp. UNC404CL21Col

 Score = 47.8 bits (112), Expect = 1e-10
 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 11/139 (7%)

Query: 28  GDSFVEGHEDEMLVQQFDHVVTVPTDPQSGQPSGQRV----HKPFKFTVALNKAVPLLYN 83
           G+S  + H+D + +  +   ++ P    +    G       H+   FT  L+   PLLY 
Sbjct: 15  GESQDKDHKDWIEINSWSQAISQPRSATASTAGGHTAERCEHRDMVFTKDLDVVSPLLYQ 74

Query: 84  ALSSGEKLKTVELKWYRTSIEGKQENFFTTKLENASIVDIHCEMPHCQDPAKSDFTQNVT 143
             S G     V ++++R   EG +  +   KL+NA + ++  ++     P         T
Sbjct: 75  HASGGTTFGEVTIEFFRADGEGNRVKYLEVKLKNAILSEVDSQVVAQGIPTD-------T 127

Query: 144 VSLSYRKITWDHVNAGTSG 162
            SL Y  + W +    ++G
Sbjct: 128 FSLRYAAVQWKYTQQKSAG 146