Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  202 bits (513), Expect = 4e-56
 Identities = 121/350 (34%), Positives = 193/350 (55%), Gaps = 2/350 (0%)

Query: 226 ITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQIC 285
           I +  +  A   +V ++ +      PL+R       ++ GN  L Q +A + KDE G++ 
Sbjct: 192 IIIVSISAALATVVLALLLTRSIVAPLNRALEAARTIASGN--LVQVIADDGKDEPGRLL 249

Query: 286 NSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMS 345
            ++      L+Q    +A S+ ++  A   LS   + +   L Q   E EQA TA+ EM+
Sbjct: 250 QALATMQVSLRQTIEQIAGSATQLGAAAQELSAVTQESSRGLQQQHNEIEQAATAVNEMT 309

Query: 346 ASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTK 405
           A+   +A++A   +  + ++ + A E +  V E V+++  + + V + A  I  ++   +
Sbjct: 310 AAVEEVARNAVSTSEASNQSTQAAQEGRTRVVETVDAIQTMTHDVQATASMIEGLAVQGR 369

Query: 406 QINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQIND 465
            I  VL VI AIAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALA RT QST +I  
Sbjct: 370 DIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIEK 429

Query: 466 MLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAME 525
           M+A ++  T   V+ M  +    + T E       +L  +T S+ ++N  N +IA+++ E
Sbjct: 430 MVAGIQNGTGQAVQSMQQSNQRTQSTLEMARAAGVALEQITQSIHQINERNLVIASASEE 489

Query: 526 QRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRF 575
           Q QV+ EV +N+  I+++  +    A Q +  ++EL   +  L+ +V RF
Sbjct: 490 QAQVSREVDRNLVNIRDLATQSASGAKQTSDATHELSRLAVGLNAMVARF 539