Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  233 bits (594), Expect = 2e-65
 Identities = 128/342 (37%), Positives = 202/342 (59%)

Query: 236 VIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKL 295
           VI V  + + +   +PL  +   + +++ G GDLT+RL + S+DE+GQ+  S N F++K+
Sbjct: 218 VIAVVGLLLANAILRPLHLMKDNLDDIAAGEGDLTRRLTITSQDELGQLAGSFNRFVDKI 277

Query: 296 QQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSA 355
             +   + D + ++   V  +S QA+ +   + +   ET+Q  TAI EMS++A  +A+SA
Sbjct: 278 HGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVATAINEMSSAAQEVARSA 337

Query: 356 DDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIG 415
             AA+  ++T+     +K+ V  ++  ++ LVN + S   ++  + +D   I SVL VI 
Sbjct: 338 QGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLDSLQQDVASIVSVLGVIR 397

Query: 416 AIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTE 475
           +IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALASRTQQST +I  M+  L++ T 
Sbjct: 398 SIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGMIDRLQSGTH 457

Query: 476 NVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSK 535
             V+ M  +    + T+ER N    SL+ +   +  +N++N  IA++A EQ  V  E+++
Sbjct: 458 AAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINR 517

Query: 536 NMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           ++  I   V  +          S  L +    L  +VG+FR+
Sbjct: 518 SVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGKLVGQFRI 559