Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  201 bits (511), Expect = 7e-56
 Identities = 114/384 (29%), Positives = 197/384 (51%)

Query: 194 TRPINFAGQDWQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLS 253
           TR     G DW +   +D     A   +      +A+++    II     ++ V  +PL 
Sbjct: 243 TRVNGVPGADWYVALVLDKDTALAMLSEFRTSALIAMIIAVVFIIALLGMLIRVLMQPLL 302

Query: 254 RLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAV 313
            +   + ++++G GDLT+RL +   DE G +  S N F+E++     +VA ++ +++   
Sbjct: 303 TMGRAMHDIAEGEGDLTRRLVIHGHDEFGALGTSFNRFVERIHTSIREVASATGQVNEVA 362

Query: 314 VHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESK 373
           + + + + S++   +Q    T     AI ++ A+A  IAQ+A  A+  +      A++ +
Sbjct: 363 LRVVSASNSSMFNSDQQASRTSSVAAAINQLGAAAQEIAQNAALASQHSSEARNLAEDGQ 422

Query: 374 QTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAA 433
           Q V + + ++  L  ++S     I  ++ +T  I  +L+VI +I++QTNLLALNAAIEAA
Sbjct: 423 QVVDKTIAAMQQLSAKISDSCGNIETLNSNTVNIGQILEVITSISQQTNLLALNAAIEAA 482

Query: 434 RAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAE 493
           RAGE GRGFAVVADEVR LA RTQ S  Q+  M+  L+      V  M  ++   E +  
Sbjct: 483 RAGEAGRGFAVVADEVRNLAHRTQDSAQQVQKMIEELQVGAREAVLTMTDSQRQSESSVG 542

Query: 494 RTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQ 553
             N   + L  VT  + E++ +N  +AT+  EQ  V   ++ ++  I  + ++   N   
Sbjct: 543 IANQAGERLGSVTQRIGEIDGMNQSVATATEEQTAVVESINVDITEINTLNQEGVENLQA 602

Query: 554 VTSVSNELQNTSHALSDVVGRFRV 577
                 +L+  +  L  +VG FR+
Sbjct: 603 TLRACADLEQQAARLKQLVGSFRI 626