Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  222 bits (565), Expect = 3e-62
 Identities = 126/351 (35%), Positives = 203/351 (57%), Gaps = 4/351 (1%)

Query: 226 ITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQIC 285
           + + L  C  V+ V  + +L     P+ RL   V  +++G GDL  RL V S DE+GQ+ 
Sbjct: 197 LLIGLFCCVLVLTVLPLVVL----SPMRRLLHRVEQIAEGGGDLKGRLEVRSADELGQLG 252

Query: 286 NSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMS 345
            + N F++KLQ +  +V   + E+D A   +++ A +N   ++      +Q  TA  +MS
Sbjct: 253 GAFNRFLDKLQPLIAEVGRVTGEVDSAARAMADMAATNDRLISSEHAALDQVSTAATQMS 312

Query: 346 ASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTK 405
           A+   +A +A  A+   ++ +  + +  + V+  + S+  L  +V S + TI  ++++T 
Sbjct: 313 AAVHEVAHNAVSASDAAQQASSQSRDGAEVVSSTIESIRQLAQEVESASGTIEALAQETS 372

Query: 406 QINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQIND 465
            I +VL+VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA+RTQ ST  I  
Sbjct: 373 SIGAVLEVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQV 432

Query: 466 MLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAME 525
            +  L++     V+ M        ++ ER   V + L+  + S+  +N++   IA +  E
Sbjct: 433 RIERLQSGVAKAVQAMQVGSSKARDSVERAAGVDEVLSGTSGSIQRINDMAAQIANACEE 492

Query: 526 QRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFR 576
           Q  VT E+++N++ I+++  +   N+AQ    S +L + S  L+++ GRFR
Sbjct: 493 QSSVTEEIARNISDIRDLSNEAASNSAQSMQASQQLSSLSRNLAELTGRFR 543