Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  204 bits (520), Expect = 8e-57
 Identities = 121/353 (34%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 226 ITLALLVCASVIIVASVTMLHVSF-KPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQI 284
           I L+L V A+VI +  V ++  S  +P+  +  ++ +++ G GDLT+RLA + +DE+GQ+
Sbjct: 363 IELSLGVLAAVIGLLLVWLMARSVTRPILGVARMLEDIASGEGDLTRRLAYDKQDELGQL 422

Query: 285 CNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEM 344
               N F++KLQ +   V  S ++        S  A      + Q  ++ +Q  TA  EM
Sbjct: 423 AGWFNRFLDKLQPIIAQVKRSVQDARSTADQSSAIATQTSAGMEQQYRQVDQVATASHEM 482

Query: 345 SASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDT 404
           SA+A  +A+SA  AA      ++   +    +     S++ L   +S+    +  ++ ++
Sbjct: 483 SATAQDVARSAAQAAQAARDADQATRQGLTVIDRTTASIDSLAADMSTAMTQVEGLAANS 542

Query: 405 KQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQIN 464
           ++I SVL+VI AIAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RTQ+S  +  
Sbjct: 543 EKIGSVLEVIRAIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRNLARRTQESVEETR 602

Query: 465 DMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAM 524
            ++  L++ T++VV  M+++    + + E  +  + +L  + D+V  + ++N  IA++A 
Sbjct: 603 QVIEQLQSGTQDVVGSMNNSHRQAQGSVEHVSQAVTALRQIGDAVTVITDMNLQIASAAE 662

Query: 525 EQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           EQ  V  E++ N+A I+++   L+  A +   VS  L + ++    ++ +FRV
Sbjct: 663 EQSAVAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQGLMDQFRV 715