Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  223 bits (567), Expect = 3e-62
 Identities = 133/425 (31%), Positives = 232/425 (54%), Gaps = 13/425 (3%)

Query: 166 ATEGSFAELMANGNVIFSDKHGVNLTPITRPINFAGQD--WQLIGYIDLTAIQANTDQLN 223
           A E +  + +  G   +   H      +  P +F G D  W L+  +    +    DQL 
Sbjct: 285 ADEQALVKQLPAGQTHYRIDHARGRVALFLPFSFPGTDARWVLMLELPTAEVMKELDQLM 344

Query: 224 WKI-------TLALLVCASVIIVASVTMLHVSFK----PLSRLNTLVANLSQGNGDLTQR 272
             +         A+LV   +I  A +  + +  +    PL  +  ++ N+SQG GDLTQR
Sbjct: 345 VALGEESRSNLAAMLVIGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQR 404

Query: 273 LAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQ 332
           L ++S++E+GQI    N F+ +LQ M  +V  S +++  A  H ++ A      +     
Sbjct: 405 LNIDSRNELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLA 464

Query: 333 ETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSS 392
           E E   TA+ EM+A+A  +A++A  AA      +R A++ +  V +   ++  L +++  
Sbjct: 465 EIELVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGR 524

Query: 393 MAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL 452
             + +  ++ D++ I+++L  I +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L
Sbjct: 525 AVDVVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNL 584

Query: 453 ASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEM 512
           A +TQQ+T +I  M+  L+  T +VV+ M+ ++     + E+ +   ++L  +T +V+ +
Sbjct: 585 AQKTQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLI 644

Query: 513 NNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVV 572
           N++N  IA++A EQ  V  ++++N+  I ++ +++   A + +  S  L   +     ++
Sbjct: 645 NDMNNQIASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLI 704

Query: 573 GRFRV 577
            +FRV
Sbjct: 705 NQFRV 709