Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  215 bits (548), Expect = 3e-60
 Identities = 125/370 (33%), Positives = 212/370 (57%), Gaps = 6/370 (1%)

Query: 211 DLTAIQANTDQ---LNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNG 267
           DL A+    D+   ++  I L LLV    ++V  +T+ HV  + ++ +   +  +++   
Sbjct: 173 DLKALDQEVDRNIMISGAIQLLLLVIG--VVVMCMTVRHVIIRRINAMRHTMNAMAEDE- 229

Query: 268 DLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTL 327
           DL++ +A+ +KDEIG + ++ N  I K +     VA  + ++      +S+ A   L  +
Sbjct: 230 DLSRSVAIGAKDEIGAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAV 289

Query: 328 NQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLV 387
           N+   ET+   +A+ EMSA+   +A++A+  A  +   +  +    +  TEA++ +  L+
Sbjct: 290 NEQRSETDMVASAMNEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLI 349

Query: 388 NQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 447
            ++   A+ I R+  D+  I+ VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 350 AEIEKAAQVIQRVESDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 409

Query: 448 EVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTD 507
           EVR LASRTQ+ST +I  M+  L++   N V+ M   ++     ++       SL ++  
Sbjct: 410 EVRTLASRTQKSTEEIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIAT 469

Query: 508 SVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHA 567
            V  +N +NT IAT+A +Q  V  E+++N++ I  +    + +A Q + +S+EL   +  
Sbjct: 470 EVGTINEMNTQIATAAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATE 529

Query: 568 LSDVVGRFRV 577
           L+ +VG+F++
Sbjct: 530 LNRLVGQFKL 539