Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  214 bits (546), Expect = 5e-60
 Identities = 126/369 (34%), Positives = 206/369 (55%), Gaps = 5/369 (1%)

Query: 209 YIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGD 268
           Y +  A+      LN  + LALL+   +    ++ +L    +PL  L    A+++ G  D
Sbjct: 176 YDEALALYERNRVLNIGLLLALLIGGGLF---AMVLLRSISRPLEELKQAAASVAAG--D 230

Query: 269 LTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLN 328
           L++ +A   KDEI ++  SI    + L+    D+  S+ ++  A   L    +     ++
Sbjct: 231 LSRTIACRGKDEITEVQQSIRQMQQTLRDTLQDIQGSATQLASAAEELHAVTQHTAQGIH 290

Query: 329 QHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVN 388
           Q  +E + A TA+ EMSA+   +A +A+  +  +      AD+ ++ VT    +++ L  
Sbjct: 291 QQNEEVQMAATAVTEMSAAVDEVAGNANRTSDASRDAETVADDGRRQVTATRQTIDQLSE 350

Query: 389 QVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 448
           ++   A T+TR++E+   I  V+ VI AIA+QTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 351 KLQQTAGTVTRLAEEAASIGQVVDVIRAIADQTNLLALNAAIEAARAGEAGRGFAVVADE 410

Query: 449 VRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDS 508
           VR LA RTQ ST +I  M+  +++ TE  V++M  +      +         +L ++ + 
Sbjct: 411 VRNLAQRTQSSTQEIERMIGAIQSATEQSVRDMQQSSEFATRSQTMAGEADQALGLIAER 470

Query: 509 VAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHAL 568
           V ++N +N +IA++A EQ QV  EV +N+ AI+++  +    A Q +  S+EL   +  L
Sbjct: 471 VGQINEMNLVIASAAEEQAQVAREVDRNLVAIRDISEQSATGAQQTSVASDELARLATHL 530

Query: 569 SDVVGRFRV 577
           + +VGRFR+
Sbjct: 531 NQLVGRFRL 539