Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  246 bits (629), Expect = 1e-69
 Identities = 178/588 (30%), Positives = 303/588 (51%), Gaps = 39/588 (6%)

Query: 1   MAQLSFKNKIIALIIA-IISLTIITSYFSVNYFISDYIKQADSQNITHNIDLMQRKLENE 59
           ++ L  + K++ L +  I+ L I+ S  +V Y +    +Q ++    H  D + +    E
Sbjct: 25  LSNLRLRMKLLLLALGPILLLAILLSGIAV-YELQSLAEQQEA----HTRDSLIQDRRAE 79

Query: 60  LNSKLALAQSLNFSMMDIGETKASSGFNKIIKIVNGYAFDDTGNMSEEDAQQYVSLAENH 119
           L   + LA++    + +          ++ + I+   ++   G     D Q    L  N 
Sbjct: 80  LKHYVELARNAIGPIYERSAEGDMQARDQAVAILERLSYGKDGYFWGYDTQAVRILQGNT 139

Query: 120 GDAVVVSPVTFNEGQPTITFSVKRFDES-------VDF-FVFNLSAFSQMMTDYATEGSF 171
            D +  S   + +  P   ++++    +       VD+ FV   S+      +   +  +
Sbjct: 140 KDKIGQSFYDYRD--PNGVYAIRELVRAGQDGSRYVDYSFVLGNSS------ELVPKVGY 191

Query: 172 AELMANGNVIFSDKHGVNLTPITRPINFAGQDWQ--LIGYIDLTAIQANTDQLNWKITLA 229
           AE +    ++F     +NL  + R +  A  ++Q  + G + +  + A           A
Sbjct: 192 AEFLPKWKMVFGTS--LNLDGVERDVQAARAEFQKRIDGLVTIMLVSA----------FA 239

Query: 230 LLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSIN 289
           LLV  +++   ++ M +    PL  +   + +++QG+GDLTQRL + S+DE+G++  S N
Sbjct: 240 LLVLMALL---AIFMSNALLSPLLLIKRNLDDMAQGDGDLTQRLPITSQDELGELAMSFN 296

Query: 290 LFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAG 349
            F+EK+  +   VA ++ ++   V  +++QA+ +   +     ET+Q  TAI EMSA+A 
Sbjct: 297 RFVEKIHSLVQQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAINEMSAAAH 356

Query: 350 SIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINS 409
            +A SA  AA     T++    +KQ V +++  ++ LV ++    E++  + +D K I  
Sbjct: 357 EVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEGLQQDVKGIVG 416

Query: 410 VLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLAT 469
           VL VI AIAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALASRTQQST +I  M+  
Sbjct: 417 VLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTGEIQGMIDR 476

Query: 470 LKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQV 529
           L++ T N V  M       E T ++ N   +SL+ ++  +  +N++N  IA +A EQ  V
Sbjct: 477 LQSATSNTVSTMLRAGEKGESTRDQANQAGESLDAISALIGTINSMNAQIAAAAEEQTAV 536

Query: 530 THEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
             E+++++  I + V  +  +AAQ    S EL   +  L  +VG+FR+
Sbjct: 537 AEEINRSVHHIADAVDGVASDAAQGAQTSRELNGLAERLQKLVGQFRI 584