Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  204 bits (518), Expect = 1e-56
 Identities = 128/368 (34%), Positives = 200/368 (54%), Gaps = 9/368 (2%)

Query: 211 DLTAIQANTDQLNWKITLALL-VCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDL 269
           D  + QA T Q+   +   +L + A+VII   +T      +PL     +V  ++  +GDL
Sbjct: 281 DQESAQARTTQITCTLLAIILGIIAAVIITRQIT------RPLRETLAVVDRIA--SGDL 332

Query: 270 TQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQ 329
           TQ LAV   DE+G +   I      L+++   + DS  +I  A   LS         +N 
Sbjct: 333 TQTLAVTRSDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNS 392

Query: 330 HTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQ 389
              ET+Q  TA+ EMSA+   +A++A+ A+      +R A +  + V EA+  +  L N+
Sbjct: 393 QKVETDQVATAMHEMSATVAEVARNAEQASQAASNADREARDGDKVVGEAIAQIERLANE 452

Query: 390 VSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 449
           V    + +T + +++ +I  V+ VI A+AEQTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 453 VGRSVDAMTELEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEV 512

Query: 450 RALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSV 509
           R LA RTQQST +I  ++A L++ T  V   M ++R     +   +     SL  +T +V
Sbjct: 513 RGLAQRTQQSTVEIETLVAALQSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTV 572

Query: 510 AEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALS 569
           + +  +N  IA +A EQ  V  E+S+++  ++++  +    + +  + S EL      L 
Sbjct: 573 SSIQAMNQQIAAAAEEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQ 632

Query: 570 DVVGRFRV 577
            +V RFR+
Sbjct: 633 TMVSRFRI 640