Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  239 bits (610), Expect = 2e-67
 Identities = 130/375 (34%), Positives = 212/375 (56%)

Query: 203 DWQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANL 262
           DW L+  +    + A  D+   KI  + L+ A   +V S  +     KP++ +  +  ++
Sbjct: 262 DWYLVAQVPEAEVFALLDEAALKILFSTLLIALAFVVLSGFVASSVSKPIAAVARMFRDI 321

Query: 263 SQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARS 322
            +G GDL QRL V+ +DE+ Q+ +  N FI K+Q   I+VA +S+++ ++ + +S QA+ 
Sbjct: 322 GEGEGDLRQRLPVQGEDELAQLASGFNSFISKIQDSVIEVAQTSEQLGKSAIDVSRQAQQ 381

Query: 323 NLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNS 382
            L         T Q +TAI EM A+   IA +A  AA   +  +R +   ++ VT+A ++
Sbjct: 382 TLEDSQDQKDRTMQVVTAINEMGATVNEIAANAAQAAEAAKDADRASGSGQKVVTQARDT 441

Query: 383 VNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGF 442
           +N L   VS + E I  ++  TK I S+L VI AI+EQTNLLALNAAIEAARAGE GRGF
Sbjct: 442 INQLSKDVSQVGEVIESLATHTKSIGSILDVIRAISEQTNLLALNAAIEAARAGEAGRGF 501

Query: 443 AVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSL 502
           AVVADEVR LASRT  ST ++  M+  L++ +   V  M  +R   +E     +   ++L
Sbjct: 502 AVVADEVRNLASRTAASTDEVQVMIDKLQSESARAVNAMSQSRSRSQEGVSAVDEASNTL 561

Query: 503 NVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQ 562
           + ++D +  ++++N  +A +  EQ  V  ++++N+  I ++ ++    A      S +L 
Sbjct: 562 SGISDQIGLISDMNIQVAAATEEQSTVVEDINRNVTEINDITQRTAATAQAAARASKDLN 621

Query: 563 NTSHALSDVVGRFRV 577
             +  L  +V RF+V
Sbjct: 622 ALATRLDQLVARFKV 636