Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  212 bits (540), Expect = 3e-59
 Identities = 125/369 (33%), Positives = 198/369 (53%), Gaps = 2/369 (0%)

Query: 209 YIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGD 268
           Y+D   I A   +  W+  L  L+    ++   + +     +PL R      N+++G  +
Sbjct: 188 YVD--DIAAQKQEFTWQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFKNIAEGEAN 245

Query: 269 LTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLN 328
           LT RL    +DE+ Q+    N F+ ++Q + I V DS     +    LSN A    +  N
Sbjct: 246 LTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQAAHATN 305

Query: 329 QHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVN 388
              QET+    AI +MSA+A  +A +A  AA   +  +  AD +   VT A+ +V  L +
Sbjct: 306 SMQQETQSVAAAINQMSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNVRQLSS 365

Query: 389 QVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 448
           ++   +E    +   + +I  +L VI  IAEQTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 366 ELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFAVVADE 425

Query: 449 VRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDS 508
           VR LASRTQQST +IN ++  ++   + V   +   R   + T + T  VMD+L ++  +
Sbjct: 426 VRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALGLIKQA 485

Query: 509 VAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHAL 568
           + ++N++N  IAT+  EQ  V  E+++N+  I E+  +    +  V   S+ +   S  +
Sbjct: 486 IGQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHTSDRIAEDSRQM 545

Query: 569 SDVVGRFRV 577
           + ++  F+V
Sbjct: 546 AQLIAVFKV 554