Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein CtpM from Pseudomonas aeruginosa PA14

 Score =  234 bits (596), Expect = 9e-66
 Identities = 140/381 (36%), Positives = 214/381 (56%), Gaps = 2/381 (0%)

Query: 197 INFAGQDWQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLN 256
           IN  G + QL+      AI      L   I     V   V++V  + + +   +PL ++ 
Sbjct: 182 INLDGVEAQLVEIKQ--AIDERIGTLIASIVAIAGVLLVVLLVIGLAVANAMLRPLHQIR 239

Query: 257 TLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHL 316
             + +++ G GDLT+RL V S DE+G++  S N F+EK+  +   +A  + ++ + V  +
Sbjct: 240 QNLDDIAAGEGDLTRRLPVTSHDELGELAGSFNRFVEKIHGLVRQIAGMTGDLKQLVEQM 299

Query: 317 SNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTV 376
           S QA  +   + +   ET+Q  TAI EMSA+A  +AQSA  AA   ++T+     +K+ V
Sbjct: 300 SAQAERSEQAMERQRHETDQVATAINEMSAAAHEVAQSAQRAAEAAQQTDHEGQAAKRVV 359

Query: 377 TEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAG 436
             ++  ++ LV+++     ++  + +D + I SVL VI +IAEQTNLLALNAAIEAARAG
Sbjct: 360 DGSIERIHALVDEIRDSGSSLDSLQQDVQSIVSVLGVIRSIAEQTNLLALNAAIEAARAG 419

Query: 437 EQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTN 496
           E GRGFAVVADEVRALASRTQQST +I  M+  L+  T   V  M  +    E T+ + N
Sbjct: 420 EAGRGFAVVADEVRALASRTQQSTQEIQGMIDRLQQGTNAAVDAMRRSGEAGEGTSNQAN 479

Query: 497 HVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTS 556
              DSL+ +   +A +N +N  IA++A EQ  V  E+++++  I   V  +   A Q   
Sbjct: 480 QAGDSLDAIAQLIATINAMNAQIASAAEEQTAVAEEINRSVHQIAGAVDSVADEAQQGAQ 539

Query: 557 VSNELQNTSHALSDVVGRFRV 577
            +  L      L  +VG+FR+
Sbjct: 540 TARSLAQLGQGLGRLVGQFRI 560