Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  268 bits (686), Expect = 4e-76
 Identities = 152/356 (42%), Positives = 226/356 (63%), Gaps = 3/356 (0%)

Query: 225 KITLALLVCASVIIVA---SVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEI 281
           KI  ++ + + +II+A    V +L+     +  L   +  LS G+ DLT RLA+ SKDE+
Sbjct: 332 KIYRSIAIASLLIIIALAFCVFLLNKIIADMVMLKNRIDTLSTGDADLTSRLAITSKDEL 391

Query: 282 GQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAI 341
             I +S+N FI  LQ M ++++ +S++I + +  L + + +N   L++H+ ETE  +TAI
Sbjct: 392 AAIGHSVNSFIGYLQAMMLEISHASQKITQGIGQLDSHSENNRQALSKHSSETELVVTAI 451

Query: 342 EEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMS 401
            +M+ASA ++AQSA   A  T + N  A  S  TV++A  SV  L N+++S +++I  MS
Sbjct: 452 SQMNASADAVAQSAGKMAASTHQANEEAKTSTLTVSDAAGSVQALANEMNSASQSIHTMS 511

Query: 402 EDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTS 461
           E+T QI SVL VI  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASRTQ  T+
Sbjct: 512 ENTNQIISVLGVIKEIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSCTT 571

Query: 462 QINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIAT 521
           QI  +L TL+   +   + M  T+  C++  + T  V  +L  VTDS+AE+N+L   IA+
Sbjct: 572 QIEQILTTLRRDADTAEQLMLETQNSCQQVTQNTARVTSNLGAVTDSIAELNDLGGQIAS 631

Query: 522 SAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           ++ +Q  VT E+S+NM  I+ M + L  N  Q    +  L   +  LS +V +F++
Sbjct: 632 ASEQQSVVTAEISQNMHTIEAMAQTLLQNGQQTLESTQSLSAANQQLSAMVRKFKL 687