Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  265 bits (676), Expect = 5e-75
 Identities = 147/362 (40%), Positives = 224/362 (61%), Gaps = 3/362 (0%)

Query: 219 TDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANL---SQGNGDLTQRLAV 275
           T  +N K  + LL    ++ + +V ML  + + ++ ++ +V NL   ++G GDLT+RL V
Sbjct: 193 TKHMNDKAMMILLFALVLVAITAVVMLVAAQRMVNPIHNMVQNLEDIAKGEGDLTKRLDV 252

Query: 276 ESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETE 335
           +  DEI  +  + N F++KLQ +  DVA ++ E+     ++S+Q  +    L  H  ET+
Sbjct: 253 QGSDEIAMLGRAFNQFVDKLQGIIKDVARATVEVKSGADNISSQTAAMAQQLISHNNETD 312

Query: 336 QAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAE 395
           Q +TAI EMSA+A  +A S    A  T+   +    +++ V  +++ V+ L+ ++   A 
Sbjct: 313 QVVTAITEMSATASEVAMSTTQVAEATQAATQDVGNAQECVDSSLHEVSTLMAEIDMAAG 372

Query: 396 TITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASR 455
            I  ++E +++INSVL VIG IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASR
Sbjct: 373 HINSLNEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASR 432

Query: 456 TQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNL 515
           TQ ST +IN+ML+ L       V  M+S++  C  +   +  + DSL  VT +V  +N++
Sbjct: 433 TQASTLEINEMLSELHNLVSLAVSSMESSQQSCHRSVTSSRAISDSLGAVTSAVTSINDM 492

Query: 516 NTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRF 575
           +T IAT+A EQ  VT E+++N+ AIQE+V +L   +   +  S  L N    L  +VG+F
Sbjct: 493 STQIATAATEQSSVTEEINRNVFAIQEIVNELLQASNSASDTSQGLANEGRNLDTLVGQF 552

Query: 576 RV 577
           +V
Sbjct: 553 KV 554