Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  288 bits (738), Expect = 4e-82
 Identities = 161/380 (42%), Positives = 239/380 (62%), Gaps = 6/380 (1%)

Query: 201 GQDWQLIGYIDLTAIQANTDQLNWKITLA---LLVCASVIIVASVTMLHVSFKPLSRLNT 257
           G+ W L   +D +   A  DQ      ++   +L+CA  I++    +L++ ++P+  L  
Sbjct: 255 GKQWFLFIGLDKSNAYAVVDQALTSALVSSAIMLLCAISILLG---VLYLLYRPILSLKA 311

Query: 258 LVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLS 317
           +V  LS+GNGDLT+RL +  +D++GQI   IN FI  LQ M  +V  +S  I  +V  L+
Sbjct: 312 MVTELSKGNGDLTKRLEIHCEDDLGQISMGINQFIANLQAMMREVLQASAHISGSVERLN 371

Query: 318 NQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVT 377
            +  +N + L+ HT+ETEQ + A+EEMSA+A  +AQ+  + A  T+ TN  A  SKQ V 
Sbjct: 372 GETETNRHILSAHTKETEQIVAAVEEMSATANDVAQNGSETASFTQLTNEQALASKQVVA 431

Query: 378 EAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGE 437
           +A  +VN LV +V   A+ I ++  DT  I  VL+VIG IA+QTNLLALNAAIEAARAGE
Sbjct: 432 QATETVNRLVREVEHTADKIGQIDRDTINITQVLKVIGDIADQTNLLALNAAIEAARAGE 491

Query: 438 QGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNH 497
           QGRGFAVVADEVRALA+RTQ ST++I + L+ L+  + + +  M+ T+  C ETA  T  
Sbjct: 492 QGRGFAVVADEVRALAARTQDSTAEIEETLSNLRDASNSAIHSMEVTKQTCLETASTTER 551

Query: 498 VMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSV 557
           V   L+ +  SV ++N+LNT IAT+A EQ  V+ E+++NM+AI +M  +L  +     + 
Sbjct: 552 VATDLDAIGSSVNQINDLNTQIATAAEEQSSVSAEITRNMSAICDMANELARSGESSRNE 611

Query: 558 SNELQNTSHALSDVVGRFRV 577
           +  L   +  L  +VG+F++
Sbjct: 612 TVNLATANQQLEQIVGQFKL 631