Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  218 bits (556), Expect = 4e-61
 Identities = 129/403 (32%), Positives = 220/403 (54%), Gaps = 16/403 (3%)

Query: 191 TPITRPINFAGQDWQL------------IGYIDLTAIQANTDQLNWKITLALLVCASVII 238
           T + R I+  G+ + L             G +D+   +++++Q    I   L++   +  
Sbjct: 232 TEVIRTIDLDGKSYALYRHGMQDYSGKTFGVLDIALDRSHSEQAMSDIRFKLIMIGFIAF 291

Query: 239 VASVTMLHVSFK----PLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEK 294
           +    +     K    P++     + ++++G GDLT+R+ V+SKDEI Q+  + N F EK
Sbjct: 292 LIGTAIAWFIAKSITRPIAETTNALNDIAEGEGDLTRRIEVKSKDEIAQLALAFNRFAEK 351

Query: 295 LQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQS 354
           +      V+DS+  +  +   +S           +   ETEQ  TA+ EM+A+   +A +
Sbjct: 352 IHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLETEQVATAMNEMAATVQEVAHN 411

Query: 355 ADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVI 414
           A DAA      +   +  K  V + +++++ L ++++  A+ I  +  +T QI+SVL VI
Sbjct: 412 ATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAAKAINELERNTAQIDSVLVVI 471

Query: 415 GAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTT 474
             IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LASRTQ STS+I  M+  L+ + 
Sbjct: 472 RNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTSEIQQMIEALQHSA 531

Query: 475 ENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVS 534
           ++ V  M+++    +      +   ++L  +T +V+ ++ +N  IA++A EQ  V+ E++
Sbjct: 532 KSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQMNIQIASAANEQCAVSAEIN 591

Query: 535 KNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           KN+  I ++      +A Q     +EL   S  L+ ++ +FR+
Sbjct: 592 KNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQFRI 634