Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  261 bits (668), Expect = 4e-74
 Identities = 150/356 (42%), Positives = 224/356 (62%), Gaps = 7/356 (1%)

Query: 227 TLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQ-----GNGDLTQRLAVESKDEI 281
           T ALL+   +I+VA V  L  +     RL  +V  + +      +GDLTQ+  +  ++E+
Sbjct: 174 TEALLL--GLILVAIVASLLSALFMSRRLVNIVHQIKRVVEHLADGDLTQKTQISGQNEL 231

Query: 282 GQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAI 341
             +   ++  I+ L+ M  D+A +S+ +   +  L+ Q+ +N + L  H  ET+Q +TA+
Sbjct: 232 CALGADLDRVIDHLRHMISDIAQASEHMSDQIGQLNVQSNANTHALQTHAVETDQVVTAM 291

Query: 342 EEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMS 401
            EMSA+A ++A  A  AA  T++ N  AD+SK+ V +A N+V  LV +V + A TI  M+
Sbjct: 292 TEMSATAHNVAGDAASAARFTQQANEQADKSKKAVEQAANTVVALVGKVDTAAHTIAEMN 351

Query: 402 EDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTS 461
           E+T+ I ++L VIG IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVRALA+RTQ ST+
Sbjct: 352 ENTRHIATILDVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTA 411

Query: 462 QINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIAT 521
           +IN ML  L+T   + V  MD T+  C++ A+ T  V +SL  +T  V ++N L+  IAT
Sbjct: 412 EINQMLERLRTGANSAVNAMDETKQSCQDAADTTTLVTESLETLTTYVFDINGLSNQIAT 471

Query: 522 SAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           +A EQ  V+ E+++N+  I+EMV +LN +     + +  L  T   L+ VV  FR+
Sbjct: 472 AAEEQSAVSEEINRNLNTIREMVEELNQSGKATLNSATSLAATKEQLTGVVSHFRL 527