Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  261 bits (666), Expect = 7e-74
 Identities = 155/389 (39%), Positives = 232/389 (59%), Gaps = 13/389 (3%)

Query: 201 GQDWQLI--GYID----------LTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVS 248
           G DW L    YID           T  +   D+    + +ALL+ A    V  VT   + 
Sbjct: 167 GTDWMLGTGAYIDDIDAVVEDYRTTVTEQMIDKSYAILLIALLLAAITAPVILVTAQRM- 225

Query: 249 FKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKE 308
             P+  +   + ++++G GDLT+RLAV+  DEI Q+  S NLF++KLQ +  DVA ++ +
Sbjct: 226 VTPIKNMADNLNDIAKGEGDLTKRLAVKGDDEIAQLGRSFNLFVDKLQTIIGDVAHATAK 285

Query: 309 IDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRY 368
           +  A   + +Q +     L  H  ET+Q +TAI EMSA+A  +AQ+    A  T      
Sbjct: 286 VKTAANAIHDQTKVMSRQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGD 345

Query: 369 ADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNA 428
              +++ V  ++  ++ L+ Q+++ A  I  +SE +++INSVL VIG IAEQTNLLALNA
Sbjct: 346 VANAQRCVDASLEEISALMAQINNAASNIQSLSEQSQKINSVLSVIGGIAEQTNLLALNA 405

Query: 429 AIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHC 488
           AIEAARAGEQGRGFAVVADEVR LASRTQ ST +IN+ML+ L       VK M+ ++  C
Sbjct: 406 AIEAARAGEQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVSLAVKTMEESQQSC 465

Query: 489 EETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLN 548
             + + +  + +SL  VT +V  +N+++T IAT+A EQ  VT E+++N+ AIQE+V +L 
Sbjct: 466 IRSVDSSRAISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELL 525

Query: 549 MNAAQVTSVSNELQNTSHALSDVVGRFRV 577
            ++ +  SVS  +      L  +VG+F++
Sbjct: 526 HSSEEAASVSQTVSQEGLNLGKLVGQFKI 554