Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  213 bits (541), Expect = 2e-59
 Identities = 118/349 (33%), Positives = 206/349 (59%)

Query: 229 ALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSI 288
           ALL+ A  ++V  + +  +   PL ++   +  ++ G+GDL+ RL VES+DEIG++ N+ 
Sbjct: 147 ALLILAGSLLVIFIILKRLVISPLDKVVAALEEIANGDGDLSHRLPVESEDEIGKLANAF 206

Query: 289 NLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASA 348
           N F+E++      V ++S  +      L   ++SN   +    +ETE A+TA+ ++SASA
Sbjct: 207 NGFVEQIHGTITRVHETSGLLLGDAKALGTLSQSNNQRVQAQLKETEAAVTAVTQLSASA 266

Query: 349 GSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQIN 408
             +A +A   A    + +R  D+ ++     +     L  +++  A++++++ ++T++I+
Sbjct: 267 NEVAINAKRTADAATQADRAVDDGQRQFDSGLAITRQLAGELARSAQSVSQLQQETQRID 326

Query: 409 SVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLA 468
            V+ VI +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASRTQQ+T +I  M+ 
Sbjct: 327 EVVVVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQQATGEIQKMIQ 386

Query: 469 TLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQ 528
            +++     V  M S++    +   R+  +   L+ VTD V+ ++N+N  ++ +A EQ  
Sbjct: 387 QVQSRVAETVNVMQSSQTLSNQGVNRSEEIKLVLSKVTDLVSNISNMNIEVSHAAQEQTC 446

Query: 529 VTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577
           VT  +S+ +  +  +    ++++  +   S  L +    L  +V  FR+
Sbjct: 447 VTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQGERLRTLVTSFRL 495