Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  222 bits (566), Expect = 3e-62
 Identities = 126/368 (34%), Positives = 204/368 (55%), Gaps = 1/368 (0%)

Query: 210 IDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDL 269
           +DL A +  T Q    +T+A LV    +++A      +    +  +   + ++  G+G+L
Sbjct: 176 LDLQASEQATTQTQISVTIATLVAIVALVIAYFGP-KIIVNAIRDITDRINDIVDGDGNL 234

Query: 270 TQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQ 329
           TQR+ +  +DEIG++ N+ NLF+ +LQQM I +   +K++ + V +L+ ++ + +    +
Sbjct: 235 TQRIPITRQDEIGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENLATKSTTTIGISYE 294

Query: 330 HTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQ 389
             Q  +  +TA+ EMSA+   +A +A   A    + N    E K  +T++VN +  L   
Sbjct: 295 QEQFVDTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIEGKNILTQSVNHIQQLSES 354

Query: 390 VSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 449
           V      I ++S ++  I SVL VI +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 355 VKQAVAVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 414

Query: 450 RALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSV 509
           R LASRT+ ST  I  M+  L+    + VK ++S       T    +   D+L+ + +S 
Sbjct: 415 RTLASRTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLASQTQDALDEILNST 474

Query: 510 AEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALS 569
           ++++ ++T  AT+  EQ  VT E+++N+  + +  R  N    +   +    Q     L 
Sbjct: 475 SKVSEMSTQTATATEEQTHVTEEINRNLTELSDKTRYCNTVIQETQQIVVNTQTICSNLQ 534

Query: 570 DVVGRFRV 577
             V RF+V
Sbjct: 535 KEVSRFKV 542