Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  217 bits (553), Expect = 1e-60
 Identities = 128/379 (33%), Positives = 211/379 (55%), Gaps = 7/379 (1%)

Query: 203 DWQLIGYIDLTAIQANTDQLNW---KITLALLVCASVIIVASVTMLHVSFKPLSRLNTLV 259
           DW+L+  ++   I +    L W    +   LLV   +++VA   +  + FK L R+   +
Sbjct: 255 DWELVFVMNKDEIMSQATTLAWWMSAVGAGLLVIFGLVLVA---IFKIQFKDLERVALAL 311

Query: 260 ANLSQGNGDLTQRL-AVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSN 318
            ++++G+GDLT R+    S DEIG + +  N F+E+L  M   +   + +++      S 
Sbjct: 312 NDIAEGDGDLTVRIHTANSHDEIGILASGFNRFVERLHGMISRMHKIAGQLEYQAQGSSA 371

Query: 319 QARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTE 378
            A  N   +     E     TA+ EM+++   IA +A+  A   +     ++  ++ V +
Sbjct: 372 SATDNSQRIAVQQDEVTMVATAVTEMASATEEIASNAEHTAQTAQDAVGLSNHGQKQVMQ 431

Query: 379 AVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQ 438
           +  S+  L N+V +    I+ ++E +++INS+L  I  IAEQTNLLALNAAIEAARAGEQ
Sbjct: 432 SQQSIRNLANEVETAGRIISELNEHSQKINSILLTISGIAEQTNLLALNAAIEAARAGEQ 491

Query: 439 GRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHV 498
           GRGFAVVADEVR L+ RT  ST +I  M+ TL+ T    VK M  +    E +    N  
Sbjct: 492 GRGFAVVADEVRVLSQRTHSSTQEIQAMIETLQQTAGKAVKSMTQSHDMAETSVADANSA 551

Query: 499 MDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVS 558
            +SL  ++ ++ E++++ + IAT+A EQ  VT E+++N  +I+E+   L++ A      +
Sbjct: 552 SESLLQISKAINEISDMASQIATAAEEQTSVTSEINRNTESIREVSENLSIEAQSSMVQA 611

Query: 559 NELQNTSHALSDVVGRFRV 577
            EL + + +L   VGRF++
Sbjct: 612 QELAHLAASLQQEVGRFKL 630