Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., hemolysin D from Pseudomonas fluorescens FW300-N2E3

 Score =  268 bits (685), Expect = 2e-76
 Identities = 154/390 (39%), Positives = 233/390 (59%), Gaps = 31/390 (7%)

Query: 16  NSNTEFDGVRAAQSRKKGFLGLAAAIVVAGGSYALY-WHFIGSRYI-STDNAYAAAEIAE 73
           N+ T      A    K+ F+ L   I+V  G   ++ WH +  R+  STD+AY    + E
Sbjct: 6   NNPTPESAQDAGNPGKRKFMLLVLTILVIVGCLGVWGWHELYGRWSESTDDAYVNGNVVE 65

Query: 74  VTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDE 133
           +TP V G +  +   D + V +G VLV  D  DA++ L  A+A+LA   R+VR   +N +
Sbjct: 66  ITPLVTGTVVSIGADDGDLVHEGQVLVNFDPNDAQVGLQSAQANLARTVRQVRGLYSNVD 125

Query: 134 GLSAMVEAQEANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQ 193
           G+ A V AQ       KA+++ AQ +F       +RR++L   G++S EEL++A+     
Sbjct: 126 GMKAQVNAQ-------KAEVQKAQDNF-------NRRKNLAAGGAISQEELSHARD---- 167

Query: 194 AQANLNAAKAAMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLER 253
              +L +A+ A+A AQ    +T       +AL D+T V S+P+V  A A+  QA +   R
Sbjct: 168 ---DLTSAQNALANAQQQLATT-------SALVDDTVVSSHPDVQAAAAQVRQAYLTNAR 217

Query: 254 TVIRAPISGIVAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLT 313
           + + AP++G VAKR VQ+G+RVQ G  LM V+P D +++DANFKE +LRD+++GQPV + 
Sbjct: 218 STLIAPVTGYVAKRTVQLGQRVQPGTALMAVIPLDQLWIDANFKETQLRDMRIGQPVDIE 277

Query: 314 ADLYGDDVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPL 373
           ADLYG +V Y+G +     GTGSAF+++PAQNATGNWIK+VQR+P+RI ++ + L  +PL
Sbjct: 278 ADLYGSEVKYNGTIDSLGAGTGSAFALLPAQNATGNWIKIVQRVPVRIHINAEQLAQHPL 337

Query: 374 QVGLSMVATIDTAGTTDPQTLVQYRAAKVS 403
           +VGLS +  ++    + P  L Q    K S
Sbjct: 338 RVGLSTMVNVNLRDQSGP-VLAQQSPQKAS 366