Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., Multidrug resistance protein A from Pseudomonas fluorescens FW300-N1B4

 Score =  196 bits (499), Expect = 7e-55
 Identities = 123/352 (34%), Positives = 199/352 (56%), Gaps = 24/352 (6%)

Query: 14  SNNSNTEFDGVRAAQSRKK--GFLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAEI 71
           +  ++ E   V A QS++K  G L    A+VV  G +A+ +    S   STDNAY   ++
Sbjct: 11  ATGASAEIPVVVARQSKRKMIGILLCIGAVVVVAGGWAMAF---SSGSTSTDNAYVRGDL 67

Query: 72  AEVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLAN 131
             +   V G +  V V D + V+ GDVL ++DD D R  L QA A+++ A+ R+      
Sbjct: 68  TSLAAKVAGYVTAVEVEDNQTVRAGDVLFRIDDRDYRARLAQAVANVSAAEARLTH---- 123

Query: 132 DEGLSAMVEAQEANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGF 191
              + A  + Q A  ++ +AQ ++A A+   A     R + L+ S +VS   +    T  
Sbjct: 124 ---VDAETQLQRALIRQAEAQRRSASAEMNLATKTHDRSQKLIVSNAVSQALVDETGTAR 180

Query: 192 AQAQANLNAAKAAMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDL 251
           ++A+A ++AA A + +AQ  +++ + +Q+  A             V  A+A  + A+IDL
Sbjct: 181 SRAEATVSAASATV-EAQQQRITVLVAQREAAIAA----------VAQAQAARDLAQIDL 229

Query: 252 ERTVIRAPISGIVAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVT 311
           + TV+ AP+ G++  RQV+VGR V  G+ L+ +VP + ++V ANFKE +L  ++ GQ V 
Sbjct: 230 DSTVVHAPVDGVIGNRQVRVGRFVTPGVSLLDIVPVNDVWVVANFKETQLEHIRPGQRVR 289

Query: 312 LTADLYGDDVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIEL 363
           +T D Y D     GVV  F+ G+GSAFS++P  NATGN+++VVQR+P++I L
Sbjct: 290 ITVDGYPDG-ALEGVVDSFAPGSGSAFSLLPTDNATGNFVRVVQRVPVKIRL 340