Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

 Score =  170 bits (430), Expect = 7e-47
 Identities = 123/354 (34%), Positives = 182/354 (51%), Gaps = 23/354 (6%)

Query: 40  AIVVAGGSYALY-WHF--IGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVDTEYVKQG 96
           A+ +AG    LY W      S   ST+NA    +   + P + G + +V V D ++VK G
Sbjct: 44  AVALAGVLVVLYAWQLPPFASPIESTENAQVKGQTTLIGPQLSGYVYEVPVQDFQFVKAG 103

Query: 97  DVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQLKAA 156
           D+LV+LDD   R  L QA A LA+ K  + + L       A +  ++A  Q   AQ + +
Sbjct: 104 DLLVRLDDRIYRQRLDQAIAQLAVQKASLANNLQQRRSAEATIGQRQAELQNSIAQSRKS 163

Query: 157 QADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQATKLSTI 216
            AD       L R + LV  GSVS  EL   +   AQA A +  A+A +  A+    + I
Sbjct: 164 AAD-------LRRNQALVTDGSVSKSELDVTRAADAQANAAVAEARAVLQIAREDLQTVI 216

Query: 217 GSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQVGRRVQ 276
            ++ +  A   N           A+A  E A+IDL+ T I AP  G + +  V++G  V 
Sbjct: 217 VNRGSLEASVAN-----------AQAAIELARIDLDNTRIVAPRDGQLGQIGVRLGAYVN 265

Query: 277 VGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSGGTGS 336
            G  LM +VP    ++ AN KE ++ +V++GQPV+ T D   D    HG V   S   GS
Sbjct: 266 SGAQLMALVPEQR-WIVANMKETQMANVRLGQPVSFTVDAL-DGHEMHGHVQRISPAAGS 323

Query: 337 AFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATIDTAGTTD 390
            FS++PA NATGN++K+ QR+P+RI +D        L+ G+S+V +IDT+   D
Sbjct: 324 EFSLLPADNATGNFVKISQRIPVRIVVDADQPMLEHLRPGMSVVVSIDTSADGD 377