Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  167 bits (423), Expect = 5e-46
 Identities = 122/356 (34%), Positives = 185/356 (51%), Gaps = 25/356 (7%)

Query: 43  VAGGSYALY-WHF--IGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVDTEYVKQGDVL 99
           +AG S  LY W      S   +T+NAY    +  ++P + G +A+V V D E V+ G +L
Sbjct: 25  LAGLSLVLYAWRLPPFASSVETTENAYVRGYVTTISPQLSGYVAEVPVRDYEEVRAGQLL 84

Query: 100 VQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQLKAAQAD 159
           V++DD      L QA+A LA  +  + +    +    A + A EA     KA L  A+A 
Sbjct: 85  VRIDDRIYVQKLAQAKATLATQRSALANSFEQELSAKAGIAASEAQLDGAKAALATARAT 144

Query: 160 FERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQATKLSTIGSQ 219
           ++R +        L   G  +  +   A+  F QA A +  A A +  ++ +  +T+G  
Sbjct: 145 WDRIR-------PLADKGVATRSDADQARAAFEQADAGVKQAIANLEVSRQSLATTLG-- 195

Query: 220 KANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQVGRRVQVGM 279
            A A L  +        V  A+A  E A+IDL+ T I AP +G + +   +VG+ V  G 
Sbjct: 196 -ARAGLEGS--------VAGAEAAVELAEIDLDNTRIVAPRAGRLGEIGARVGQYVTAGT 246

Query: 280 PLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSGGTGSAFS 339
            L++VVP + +++ ANFKE +L  ++VGQPVT++ D     V   G +  FS   GS FS
Sbjct: 247 QLLSVVPHE-VWIVANFKETQLDGMRVGQPVTISVDALNRQV-LRGHIERFSPAAGSEFS 304

Query: 340 MIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATIDTAGTTDPQTLV 395
           +I   NATGN+ KV QRL +RI +DP+   A  L  GLS+V  +D AG  +PQ  +
Sbjct: 305 IIRPDNATGNFTKVAQRLGVRIAVDPEQPMADRLAPGLSVVVRVDKAG--EPQAAI 358