Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., multidrug export protein EmrA from Klebsiella michiganensis M5al

 Score =  257 bits (656), Expect = 5e-73
 Identities = 150/394 (38%), Positives = 217/394 (55%), Gaps = 29/394 (7%)

Query: 11  SMNSNNSNTEFDGVRAAQSRKKGFLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAE 70
           S N+ +   +  G +  + RK   L L    ++   +Y +YW  +   +  TD+AY A  
Sbjct: 2   SANAESQTPQQPGSKKGK-RKGALLLLTLLFIIVAVAYGIYWFLVLRHFEETDDAYVAGN 60

Query: 71  IAEVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLA 130
             ++   V G + +V   +T+YV++GD LV LD TDA+ A  +A+  LA + R+ R  + 
Sbjct: 61  QVQIMAQVSGSVTKVWADNTDYVQKGDPLVTLDQTDAQQAFEKAQTQLAASVRQTRQQMI 120

Query: 131 NDEGLSAMVEAQEANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTG 190
           N + L A +E +       K  L  AQ D       L+RR  L  +  +  EEL +A+  
Sbjct: 121 NSKQLQASIEVK-------KTALSQAQTD-------LNRRIPLGAANLIGREELQHARDT 166

Query: 191 FAQAQANLNAAKAAMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKID 250
            A AQA L+ A              I    AN A+   T ++  P VL A      A + 
Sbjct: 167 VASAQAELDVA--------------IQQYNANQAIVLGTKLEQQPAVLQAATEVRNAWLA 212

Query: 251 LERTVIRAPISGIVAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPV 310
           L+RT I +PISG V++R VQ G ++    PLM VVP  ++++DANFKE +L  +++GQP 
Sbjct: 213 LQRTKIVSPISGYVSRRSVQPGAQISSTTPLMAVVPATNLWIDANFKETQLAHMRIGQPA 272

Query: 311 TLTADLYGDDVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQA 370
           T+ +D+YGDDV Y G V G   GTGSAFS++PAQNATGNWIKVVQRLP+RIELD K L  
Sbjct: 273 TVISDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDEKQLAE 332

Query: 371 YPLQVGLSMVATIDTAGTTDPQTLVQYRAAKVSE 404
           +PL++GLS +  ++T          Q R++ V E
Sbjct: 333 HPLRIGLSTLVEVNTTDRGGEMLASQVRSSPVYE 366