Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., Colistin resistance protein EmrA from Enterobacter sp. TBS_079

 Score =  178 bits (451), Expect = 3e-49
 Identities = 130/352 (36%), Positives = 186/352 (52%), Gaps = 25/352 (7%)

Query: 38  AAAIVVAGGSYALY-WHFIGSRYIS--TDNAYAAAEIAEVTPAVGGIIAQVNVVDTEYVK 94
           AAAI + G    LY W        S  TDNAY   +   ++P V G I +V V D + VK
Sbjct: 25  AAAIGIVGVLVILYAWQLPPFTRHSQFTDNAYVRGQTTFISPQVNGYITEVKVQDFDRVK 84

Query: 95  QGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQLK 154
           +G++L+Q+DD   R  + QAEA LA+    + + L   +   A++   EA  +  +AQ  
Sbjct: 85  KGELLLQIDDRIYRQRVHQAEAQLAMKIAALNNNLQQRKSAEAVIAKNEAALKNARAQSL 144

Query: 155 AAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQATKLS 214
            +QAD +R K       DL   GS+S  E   A    AQ  A+++ AKA +  ++    +
Sbjct: 145 KSQADLKRVK-------DLTADGSLSIRERDAALASAAQGSADIDQAKATLEMSRQDLQT 197

Query: 215 TIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQVGRR 274
            I ++ A  A  +N           AKA  E A+IDL+ T I AP  G + +  V++G  
Sbjct: 198 VIVNRGALEADVEN-----------AKAALELAQIDLQNTRIVAPRDGQLGQIAVRLGAY 246

Query: 275 VQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSGGT 334
           V  G  L T+VP  H +V AN KE +L +++VGQPV  T D   +D  Y G V   S  T
Sbjct: 247 VTAGTHLTTLVPPQH-WVIANIKETQLAELRVGQPVKFTVDAL-NDKAYQGRVESISPAT 304

Query: 335 GSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYP-LQVGLSMVATIDT 385
           G  FS I   NATGN++K+ QR+P+RIE+   D +AY  L+ G+S+  TIDT
Sbjct: 305 GIEFSAITPDNATGNFVKIAQRIPVRIEV-LGDQEAYQLLRPGMSVQVTIDT 355