Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., hemolysin D from Burkholderia phytofirmans PsJN

 Score =  188 bits (477), Expect = 2e-52
 Identities = 118/338 (34%), Positives = 181/338 (53%), Gaps = 26/338 (7%)

Query: 49  ALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVDTEYVKQGDVLVQLD--DTD 106
           A YW F+G    +TD+AY   ++  + P V G +  V V D ++V   DVL++LD  D D
Sbjct: 16  ASYWFFVGRFVETTDDAYVGGDVTVMAPKVNGFVTDVLVHDNQFVHANDVLIRLDARDYD 75

Query: 107 ARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQLKAAQADFERAKID 166
           ARLA   AE         V+S  A+   L A    Q A      A+++A+ A+  R+  D
Sbjct: 76  ARLAQATAE---------VQSAQASVTELQAKKSLQLATINEQAAEVRASGAELTRSAAD 126

Query: 167 LSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQATKLSTIGSQKANAALT 226
            +R  +LV+  +VS + +  A     +A A ++ + AA+  AQ              A+ 
Sbjct: 127 QTRYRELVKDDAVSNQVVERADADLTKAHAAVDRSSAALIAAQR-----------QIAVL 175

Query: 227 DNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQVQVGRRVQVGMPLMTVVP 286
           D    D+   +  A+A    A +++E T IR+PI G V  R  +VG     G+ L+TVVP
Sbjct: 176 DAQIGDAEARIATAQAAQRVAALNVEYTTIRSPIDGYVGNRTARVGLLANTGVSLLTVVP 235

Query: 287 TDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSGGTGSAFSMIPAQNA 346
           +  +++DANFKE +L+ ++VG  V +  DL       HGVV   +  TG+ FS++PA+NA
Sbjct: 236 SSGLWIDANFKEDQLKKMRVGDSVDV--DLDASSTPIHGVVESLAPATGATFSVLPAENA 293

Query: 347 TGNWIKVVQRLPIRIELD-PKDLQAYPLQVGLSMVATI 383
           TGN+ K+VQR+P+R+ LD PK +Q   L+ GLS    +
Sbjct: 294 TGNFTKIVQRVPVRVRLDVPKSMQGV-LRPGLSATVKV 330