Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., hemolysin D from Burkholderia phytofirmans PsJN

 Score =  301 bits (770), Expect = 3e-86
 Identities = 168/381 (44%), Positives = 232/381 (60%), Gaps = 32/381 (8%)

Query: 30  RKKGFLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIAQVNVVD 89
           RK+    L   I++A  +Y LY+  +   +  TD+AY    + ++TP V G +  VN  D
Sbjct: 34  RKRMMTLLVIVILIAAIAYGLYYFLVARFHEDTDDAYVNGNVVQITPQVTGTVVAVNADD 93

Query: 90  TEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRV 149
           T+ VK GD LV LD  DAR+AL QAEA+LA   R+VR   A+D               + 
Sbjct: 94  TQTVKVGDPLVVLDPADARVALEQAEANLAQTVRQVRGLFADDN--------------QY 139

Query: 150 KAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQ 209
           +AQ+   QAD  RA+ DL RR  + ++G+VS EE+++A+     AQA ++AA+  +    
Sbjct: 140 QAQVAQRQADLSRAQDDLKRRLTVAQTGAVSQEEISHARDAVKSAQAAVDAAQQQL---- 195

Query: 210 ATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQV 269
                      +N ALT NTT+ ++P V  A A+   A ++  R  + AP++G VAKR V
Sbjct: 196 ----------NSNRALTANTTIANHPNVQAAAAKVRDAYLNNARNNLPAPVTGYVAKRSV 245

Query: 270 QVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAG 329
           QVG+RV  G PLM +VP   ++VDANFKEV+L+ +++GQPV LTAD+YG  V YHG V G
Sbjct: 246 QVGQRVSPGTPLMAIVPLGGVWVDANFKEVQLKHMRIGQPVELTADVYGSSVVYHGKVVG 305

Query: 330 FSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATI----DT 385
           FS GTGSAFS++PAQNATGNWIKVVQRLP+RI LDPK+L+ +PL++GLSM A +    D 
Sbjct: 306 FSAGTGSAFSLLPAQNATGNWIKVVQRLPVRIALDPKELEQHPLRIGLSMQADVSIKDDN 365

Query: 386 AGTTDPQTLVQYRAAKVSEQG 406
            G         Y+ A   + G
Sbjct: 366 GGQLGQAPNTVYQTAVFEKYG 386