Pairwise Alignments

Query, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  170 bits (430), Expect = 7e-47
 Identities = 115/361 (31%), Positives = 194/361 (53%), Gaps = 30/361 (8%)

Query: 25  RAAQSRKKGFLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAEIAEVTPAVGGIIAQ 84
           +A   +K+G L +   ++      A+Y H  G RY+ TDNAY  A+   V+  V G +  
Sbjct: 10  KANTRKKRGILLIVVPLLSVLAIGAVYLH--GGRYMETDNAYVKADKVPVSAQVAGNVDS 67

Query: 85  VNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEA 144
           + VV+ + V++G VL +LDD   ++ + +A A LA  K  +           A+++A   
Sbjct: 68  LYVVENQRVEKGKVLFRLDDAMFKVMVDKASAKLAQVKTDL-----------AVLKASYH 116

Query: 145 NEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAA 204
            +Q   A++  A+     A+ +  R+E+L+    VS  +L +A+     A+ N+   +  
Sbjct: 117 EKQ---AEITLAETKLAFAEKEQKRQENLIGKHFVSESQLEDARQNTDIARQNIQTLQKD 173

Query: 205 MAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKIDLERTVIRAPISGIV 264
           + +       ++G        + +  ++ +P  L A A+  +AK+DL R  I+AP+SG+V
Sbjct: 174 LHRIA----ESLGG-------SPDFPIEQHPSYLEALAQLNEAKLDLSRVEIKAPVSGVV 222

Query: 265 AKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYH 324
           ++   ++G+ V VG   + +V    ++++ANF E +L  VK GQ V +  D + D+  + 
Sbjct: 223 SQLP-KLGQYVNVGAIALALVADHALWIEANFTETDLTHVKPGQKVNIHIDTFPDN-HWQ 280

Query: 325 GVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATID 384
           G V   S  TG+ FS+IPAQNATGNW+K+ QR+P+RI +D   L   PL+ GLS V  ID
Sbjct: 281 GTVESLSPATGAEFSLIPAQNATGNWVKIAQRVPVRIAIDTA-LPEAPLRAGLSAVVDID 339

Query: 385 T 385
           T
Sbjct: 340 T 340