Pairwise Alignments

Query, 484 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

 Score =  242 bits (617), Expect = 3e-68
 Identities = 161/467 (34%), Positives = 233/467 (49%), Gaps = 9/467 (1%)

Query: 23  LSAFVLT----GCSVPDHYPDLATMWEANELSSTNTFSHQA-EMDWPSANWWQRYQDAQL 77
           LS +VLT    GC         + +  AN+L++       A +  WP+  WWQ Y D QL
Sbjct: 12  LSVWVLTLTISGCIGTGGIGPQSQVLPANQLATDAAIREAARDARWPTRQWWQAYGDRQL 71

Query: 78  NHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESK--VSERYQSAT 135
           +  ++ A+Q SPSL MA AR++ A+  A  A A  S  +   A+         + Y    
Sbjct: 72  DRWVDLAMQDSPSLAMAAARVRQAKAMAGVAEAAESLQINGEATLKRHNWPTDQFYGPGE 131

Query: 136 PPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAYAE 195
             D         L   Y  D WG+ R A   A      + AE+  A+L + ++I  AY +
Sbjct: 132 LADTTTWDNNAALGLSYALDLWGRERNASERAVDLAHVSVAEARQAQLELQSNIVRAYIQ 191

Query: 196 LARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQESI 255
            +  YA ++ V A L  + + ++L +KR   G+ T   VSQA+A       +L  + E+I
Sbjct: 192 FSLYYAQRDIVAATLHQQEQILDLAQKRLDGGIGTHFEVSQAQAPVPESHRQLDALDEAI 251

Query: 256 QLQKNALAALVGQGPDRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITAARWRAEAAA 315
            L +N LAAL G+GP   A +  P + L +   LPS     LLG R D+ A RW+  A A
Sbjct: 252 ALSRNQLAALAGKGPGEGAQLHRPTLALGAPLKLPSALPAELLGQRPDVVAGRWQVAAQA 311

Query: 316 QQVGIAQAQFYPDVTLSAFIGYQAFGLDHL-FDSGND-AGAIGPAIYLPLFTGGRLEGQL 373
           + + +A+A FYP+V L   +GY A G   L F +G      +GPAI LP+F GGRL  QL
Sbjct: 312 RGIDVARAGFYPNVDLVGSLGYMATGGGALEFLTGKKLTYNVGPAITLPIFDGGRLRSQL 371

Query: 374 TSAEARYQEAVAQYNGTLVQALYEVADVVTSSQALQARINKTEQAVQQAEQALHIATNRY 433
             A A Y  AVA YN TLV AL  ++D +   Q++  +     ++V  A++   IA   +
Sbjct: 372 GEAAAGYDIAVAHYNQTLVNALKGISDQLIRRQSMDKQQAFAAESVAAAQRTYDIAMVAF 431

Query: 434 QGGLATYLDVLVAEESLLNNQRALVNLQSRAFSLDLALIHALGGGFE 480
           Q GL  YL+VL A+  L   Q+    +Q+   S    L+ ALGGG E
Sbjct: 432 QRGLTDYLNVLNAQSLLFKQQQVQQQVQAARLSAHADLVTALGGGLE 478