Pairwise Alignments

Query, 484 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

 Score =  274 bits (700), Expect = 6e-78
 Identities = 156/458 (34%), Positives = 244/458 (53%), Gaps = 2/458 (0%)

Query: 25  AFVLTGCSVPDHYPDLATMWEANELSSTNTFSHQ--AEMDWPSANWWQRYQDAQLNHLIE 82
           A  L GC+            EA  L +  + +    ++  WP ++WW+   D QL+ LI 
Sbjct: 11  AMSLAGCASYSGLKTEGVSMEAQSLKAGQSLNGVTLSQAAWPKSDWWKSLGDPQLDGLIR 70

Query: 83  EALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQSATPPDGWND 142
           EAL+ SP +++A AR+  A   A  A A R   L  +  A+ S++S           ++ 
Sbjct: 71  EALRDSPDMQIASARVHQASAAAYAANAARLPTLDASGGASRSRLSRDQDPQGQGGAYST 130

Query: 143 YGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAYAELARLYAN 202
             TL ++F Y+FD WG  RAA  AA  +  +AE +  AA+L ++  +A AY++L + +  
Sbjct: 131 LRTLGVDFNYNFDLWGGQRAAWEAALGQARSAEIDRQAAQLTLAADVARAYSDLGQAHII 190

Query: 203 QETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQESIQLQKNAL 262
            +     L+   + ++L ++R   G+++     Q +++ AS +A L+  ++ +Q  K AL
Sbjct: 191 YDLASEDLKRTRQMLDLGKRRLTAGIDSEYQFQQTESLEASADATLIDAEKRLQSAKIAL 250

Query: 263 AALVGQGPDRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITAARWRAEAAAQQVGIAQ 322
           A L+G+GPDR   I  P++   S   LPS     LLG R D+ AARWR EAA++ +   +
Sbjct: 251 AVLLGKGPDRGHEIPRPNVLQASAVALPSNLPAELLGRRPDLVAARWRVEAASKNIEAGK 310

Query: 323 AQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTGGRLEGQLTSAEARYQE 382
             FYP++ LSA  G ++   D +F S +    +GP + LP+F GGRL   L + +A Y  
Sbjct: 311 TNFYPNLNLSAAAGTRSLLGDAMFGSASRFFNVGPTVSLPIFDGGRLRADLDARDADYDL 370

Query: 383 AVAQYNGTLVQALYEVADVVTSSQALQARINKTEQAVQQAEQALHIATNRYQGGLATYLD 442
           AVAQYN +LV AL +V+D +   + +  +I   + A   A+ +      RY  G+  YLD
Sbjct: 371 AVAQYNKSLVTALGDVSDTINQLRDIARQIGAQQHATDIAQSSYDTVVQRYGSGIGNYLD 430

Query: 443 VLVAEESLLNNQRALVNLQSRAFSLDLALIHALGGGFE 480
           VL  E+ LL  QR L NL +    L + L+ ALGGGFE
Sbjct: 431 VLSIEQQLLQAQRQLANLNAEQIDLSIQLMQALGGGFE 468