Pairwise Alignments

Query, 484 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Outer membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

 Score =  273 bits (697), Expect = 1e-77
 Identities = 160/465 (34%), Positives = 248/465 (53%), Gaps = 12/465 (2%)

Query: 23  LSAFVLTGCSVPDHYPDLATMWEANELSSTNTFSHQA-------EMDWPSANWWQRYQDA 75
           L A  L GC+   +Y  L T  E   L + N  + Q+          WP ++WW+   D 
Sbjct: 14  LLAMSLAGCA---NYSGLTT--EGVSLDAKNLKAAQSLNGVTLSPAAWPKSDWWKSLGDP 68

Query: 76  QLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQSAT 135
           QL+ LI EAL  SP +++A AR   A   A  A A R   L  +A  + S+++     + 
Sbjct: 69  QLDGLIREALHDSPDMQIADARAHQASAAAYAADAARMPTLDASAGVSRSRLARDQDPSG 128

Query: 136 PPDGWNDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIANAYAE 195
               ++    L  +F Y+FD WG  R A  AA  +  AAE +  AA+L +S  +A AY++
Sbjct: 129 QGGTYSTVRNLGASFNYNFDLWGGQRDAWEAALGQARAAEVDQQAAQLTLSADVARAYSD 188

Query: 196 LARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGIQESI 255
           L + +   +     L+   + ++L ++R ++G+++     Q +++ AS EA L+  ++ +
Sbjct: 189 LGQAHIIHDLASEDLKRTQQMLDLSQRRLSSGIDSQYQFQQTESLEASAEASLIDAEKRL 248

Query: 256 QLQKNALAALVGQGPDRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITAARWRAEAAA 315
           Q  K ALA L+G+GPDR   I  P +  TS   LPS     LLG R D+ AARWR EAA+
Sbjct: 249 QSAKIALAVLLGKGPDRGNEIARPKVLQTSAVALPSVLPAELLGRRPDLVAARWRVEAAS 308

Query: 316 QQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTGGRLEGQLTS 375
           + +   + +FYP++ LSA  G ++   D +F S +    + P I +P+F GGRL   L S
Sbjct: 309 KNIAAGKTRFYPNLNLSAAAGVESLLGDAMFGSASRFFNVAPTISVPIFDGGRLRADLDS 368

Query: 376 AEARYQEAVAQYNGTLVQALYEVADVVTSSQALQARINKTEQAVQQAEQALHIATNRYQG 435
            +A Y  AVAQYN +LV+AL +V+D +   + +  +I   + A   A+ + +    RY  
Sbjct: 369 RDADYDLAVAQYNKSLVKALGDVSDTINQLRDIGRQIGAQQHATDIAQDSYNTVVQRYGS 428

Query: 436 GLATYLDVLVAEESLLNNQRALVNLQSRAFSLDLALIHALGGGFE 480
           G+  YLDVL  E+ LL  QR L NL +    L + L+ ALGGG++
Sbjct: 429 GIGNYLDVLSIEQQLLQAQRQLANLNAEQIDLSIQLMQALGGGYQ 473