Pairwise Alignments

Query, 484 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., RND efflux system, outer membrane lipoprotein, NodT (NCBI) from Rhodospirillum rubrum S1H

 Score =  291 bits (745), Expect = 3e-83
 Identities = 175/468 (37%), Positives = 253/468 (54%), Gaps = 8/468 (1%)

Query: 17  YFTASLLSAFVLTGCSVPDHYPDLATMWEANELSSTNTFSHQAEM-DWPSANWWQRYQDA 75
           +  A  L A +L GC+  D     + M +A  L+ +       E+  WP   WW+ Y DA
Sbjct: 5   FLVAPSLIALILGGCAPWDGIDRQSAMTDAKTLALSAPSDPIPEVAPWPEGEWWRGYHDA 64

Query: 76  QLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASATESKVSERYQSAT 135
           QLN LI EAL  +PSL++A ARL+ A   A  A A  S  L   AS  + + +E      
Sbjct: 65  QLNQLIGEALAGNPSLKVAQARLRRAGALAGLAEAALSPHLDGGASIIDQRFNE---GGL 121

Query: 136 PPDGW----NDYGTLTLNFQYDFDFWGKNRAAVVAATSELAAAEAESVAARLMISTSIAN 191
            PD           + L   Y  D WG   A   +A  EL A+E ++ AARL ++ +IA 
Sbjct: 122 YPDSLAGKVKTENKIALEGAYTLDLWGGREAEYRSALGELRASEIDAQAARLDLAAAIAQ 181

Query: 192 AYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKAVAASVEAELLGI 251
           +YA LA  +  ++  H  L+ + +   L  ++  +GL T     QA A  A+  A++ G 
Sbjct: 182 SYARLAAAFDQRDISHEVLRQKQEIQALTARQVRSGLVTEVETRQADAAIAAARADIAGD 241

Query: 252 QESIQLQKNALAALVGQGPDRAASIEEPHITLTSRYGLPSEAGVGLLGHRADITAARWRA 311
           +E I L +  LA L G GPDR A+I  P +++ +  GLPS     L+G R DI A RWR 
Sbjct: 242 EERISLLRRDLAVLTGAGPDRGAAITRPGLSMRAGVGLPSTLPADLIGRRPDIVAHRWRI 301

Query: 312 EAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPAIYLPLFTGGRLEG 371
           EAA + +  A+A+FYP+V L+AF+G+++ GL +   +G+     GPAI LP+F  GRL  
Sbjct: 302 EAATRSIDAAKARFYPNVDLTAFLGFKSIGLANFMTAGSFMAGAGPAITLPIFDAGRLRS 361

Query: 372 QLTSAEARYQEAVAQYNGTLVQALYEVADVVTSSQALQARINKTEQAVQQAEQALHIATN 431
           QL  A A     V  YNG +++AL ++   +TS +A QAR+ +   AV   E+A  +A  
Sbjct: 362 QLAEANATLDITVELYNGAVLEALRDIVGSLTSWRANQARLAEKSLAVASLEEAYRLALL 421

Query: 432 RYQGGLATYLDVLVAEESLLNNQRALVNLQSRAFSLDLALIHALGGGF 479
           RY+ GLA YL VL AE +L+  +R     ++R + L +AL HALGGGF
Sbjct: 422 RYREGLANYLTVLSAETALIAERRQEAEFRNRQYGLSIALAHALGGGF 469