Pairwise Alignments

Query, 484 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., efflux transporter outer membrane subunit from Castellaniella sp019104865 MT123

 Score =  254 bits (650), Expect = 4e-72
 Identities = 150/421 (35%), Positives = 232/421 (55%), Gaps = 8/421 (1%)

Query: 63  WPSANWWQRYQDAQLNHLIEEALQHSPSLEMAMARLKGAQGFARQAGAIRSFDLGLAASA 122
           WP  +WW RYQD+QL+ LI++AL  +PSL++A AR++ AQ  A+ A A++   +     A
Sbjct: 44  WPQGHWWTRYQDSQLDGLIDQALLANPSLQVATARVQAAQAAAKGARALQWPQVNANFHA 103

Query: 123 TESKVSERYQSATPPDGWNDYGT---LTLNFQYDFDFWGKNRAAVVAATSELAAAEAESV 179
           T    SE Y    PP     Y T   L L   ++ D WGK RA   AA     AA+A   
Sbjct: 104 TRGLYSENY--IYPPPMGGSYQTDAGLGLQMDFNLDLWGKQRALAQAAGERAVAAQAMRQ 161

Query: 180 AARLMISTSIANAYAELARLYANQETVHAALQVRNKTVELLEKRYANGLETLGSVSQAKA 239
            AR+++ +++A AY +L    A  + +   +    + + +   RY NGL     V QA +
Sbjct: 162 QARVLLVSAVAQAYFQLQDALAQAQAIEDIVGKLQEALNITRDRYKNGLGIQVDVDQADS 221

Query: 240 VAASVEAELLGIQESIQLQKNALAALVGQGPDRAASIE-EPHITLTSRYGLPSEAGVGLL 298
             +S + +L   + ++QL  + L+AL+G+ P++  +I+   H  L +   +P+   + LL
Sbjct: 222 AVSSAQVQLSQARNNVQLLHHQLSALLGKSPEQLPAIQARTHQGLPA--SVPAHMPMALL 279

Query: 299 GHRADITAARWRAEAAAQQVGIAQAQFYPDVTLSAFIGYQAFGLDHLFDSGNDAGAIGPA 358
           G RADI AAR +AEAA  +V  A+A F P+V LSA   Y + GLD L  S ++  ++GP 
Sbjct: 280 GRRADIVAARLQAEAAGAEVSAAKADFLPNVDLSAAASYLSLGLDKLIRSSSENTSVGPV 339

Query: 359 IYLPLFTGGRLEGQLTSAEARYQEAVAQYNGTLVQALYEVADVVTSSQALQARINKTEQA 418
           I LP+F  G L  +L+   A    A+AQYN T++ A+ EVAD   S  +L  +I   E +
Sbjct: 340 ITLPIFNAGALNARLSGQRAARDIAIAQYNETVLGAIREVADASASIHSLHEQIGHQEAS 399

Query: 419 VQQAEQALHIATNRYQGGLATYLDVLVAEESLLNNQRALVNLQSRAFSLDLALIHALGGG 478
           ++    A  +A +RY+ GL  ++ VL+A+   L       +L +RA+ LD+ L  ALGGG
Sbjct: 400 LKAITSAYDVALDRYKAGLGNFVQVLLAQSEALKQTVQTTDLHARAYILDVQLATALGGG 459

Query: 479 F 479
           +
Sbjct: 460 Y 460