Pairwise Alignments

Query, 200 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 74.7 bits (182), Expect = 1e-18
 Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 4/196 (2%)

Query: 4   KSEEKRQAILEIAKDSFTKQGFEQTSMSHIAKMLGGSKATLYNYFSSKEEIFTAVMESS- 62
           +SE+K+  IL  A + F  QGF  TSM  +AK+ G SK T+Y++F SK+++F A +ES  
Sbjct: 8   RSEQKKAQILHAAIELFCGQGFPNTSMDEVAKLAGVSKQTVYSHFGSKDDLFVASIESKC 67

Query: 63  ATEQIALSFLSLDHNRELKPALLEFGYNFLNSVLTQDAMSIYRMAIHEAD-RSAIGRHFY 121
              Q+     +   + E   ALL FG  F   +++ +A+ +++  + +AD    I   F+
Sbjct: 68  VVHQVTAELFTSPQDPE--QALLHFGNYFGEMIVSPEAIEVFKTCVAQADTHPEISALFF 125

Query: 122 ENGPKRGWARLSRYITCQIECGSLKECDPWIAAMHFKALLSAQYFEPFSLGAIEKPTSSE 181
             GP+     L  Y     + G     D   A++    +L  +      LG   +   ++
Sbjct: 126 NAGPEFLLNLLENYFEQVEKLGEYHFGDLRHASVRLCMMLFGEMRLKLELGLPVEDLIAK 185

Query: 182 LKATTQRAVEAFLCLY 197
             A  +  V  FL  Y
Sbjct: 186 RPAYIKETVSMFLRAY 201