Pairwise Alignments

Query, 200 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 72.4 bits (176), Expect = 5e-18
 Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 12/200 (6%)

Query: 4   KSEEKRQAILEIAKDSFTKQGFEQTSMSHIAKMLGGSKATLYNYFSSKEEIFTAVMESSA 63
           +SE KR AI+E A   F  +GF   SM  IAK    SK T+YN+F SKE +F+A+M    
Sbjct: 8   RSELKRAAIVEAASVEFQNKGFSLASMDDIAKRADVSKRTVYNHFPSKEALFSAIMLEMM 67

Query: 64  TEQIALSFLSLDHNRELKPALLEFGYNFLNSVLTQDAMSIYRMAIHEA------DRSAIG 117
               A   L       L   L +   + +  +  +  +   R+ I EA       + A+ 
Sbjct: 68  EMLCAFESLPFSAEESLASQLTQLVQHEIKLLSAKGFIDTARVIIAEAIHKPELIQDAMS 127

Query: 118 RHFYENGPKRGWARLSRYITCQIECGSLKECDPWIAAMHFKALLSAQYFEPFSLGAIEKP 177
               +  P   W   +      I  G+LK  D  I  + F A++ A  F P  +     P
Sbjct: 128 EFSKQESPLANWFNQA------IAAGALKAKDSEILVVQFTAVIKAYCFWPQLIQGEPLP 181

Query: 178 TSSELKATTQRAVEAFLCLY 197
           + ++L   TQ  VE  +  Y
Sbjct: 182 SQAKLDEITQTVVEMIIKQY 201