Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  275 bits (703), Expect = 2e-78
 Identities = 160/369 (43%), Positives = 220/369 (59%), Gaps = 4/369 (1%)

Query: 2   SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
           +F+ LGLS  ++  V   GY  PT IQ  AIP  LQ RD++  AQTGTGKTASFVLP+L 
Sbjct: 3   NFADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPMLT 62

Query: 62  KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
            L +G+  R +  R LIL PTRELA QVAE  ++YGK+  L    + GGV    Q ++L 
Sbjct: 63  LLEKGRA-RARMPRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKLE 121

Query: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
            G DVL+ TPGRL+D   +  +    +E++V+DEADRMLDMGFI  I +I   +P   Q 
Sbjct: 122 RGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQT 181

Query: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITV-DKD-TKSALLSHLIN 239
           L FSAT+  ++++LA   +++P  + +A   ++   ++Q  +    KD  K A+L  LI 
Sbjct: 182 LFFSATMPPEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRAVLRELIR 241

Query: 240 EQQ-WDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLV 298
            Q+    A+IF   K   A+L   L++ G    A H    Q  R  +L +FK G IK LV
Sbjct: 242 SQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLLV 301

Query: 299 ATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMI 358
           A+ VAARG+DI  +S V N+D+P  A++YVHRIGRTGRA   G A + V+K   K    I
Sbjct: 302 ASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRETKFSDAI 361

Query: 359 ESRLGHLIE 367
           E  +G  +E
Sbjct: 362 EKLIGQKVE 370