Pairwise Alignments

Query, 397 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 799 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  280 bits (717), Expect = 8e-80
 Identities = 151/366 (41%), Positives = 218/366 (59%), Gaps = 1/366 (0%)

Query: 1   MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60
           M+F+ LGLS   ++ + ++GY  PT IQ QAIP +  GRD++  AQTGTGKTASF LP++
Sbjct: 1   MTFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMI 60

Query: 61  EKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL 120
           + L  G+  + +  R+LIL PTRELA QV+E    YGK   L    + GG     Q++ L
Sbjct: 61  DILASGKA-KARMPRSLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQKVL 119

Query: 121 IDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQ 180
             GVDVL+ATPGRL+DL+ + ++   +++++V+DEADRMLDMGFI  + +I+  LP   Q
Sbjct: 120 DRGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPKIRQ 179

Query: 181 FLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINE 240
            L FSAT+ +++R LA   + +P E+ I   Q     + Q LI V    K   L  L+  
Sbjct: 180 TLFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQLLRR 239

Query: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
           +    A IF   K     L   L   G    A H    Q +R + LE FK  +++ +V +
Sbjct: 240 ETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLMVCS 299

Query: 301 GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIES 360
            VAARGID+ ++S V N+D+P   ++Y+HRIGRTGRA  +G A +  + ++ K L  IE+
Sbjct: 300 DVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRAIEN 359

Query: 361 RLGHLI 366
            LG  I
Sbjct: 360 LLGKTI 365